MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-1329-P2

Family name MIR-1329 (all species)
Seed ACAGUGA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-1329-P1 
Orthologues Ami-Mir-1329  Bta-Mir-1329  Cmi-Mir-1329  Ebu-Mir-1329  Eca-Mir-1329  Laf-Mir-1329  Mdo-Mir-1329  Mmr-Mir-1329  Mun-Mir-1329  Neu-Mir-1329  Pbv-Mir-1329  Pma-Mir-1329  Sha-Mir-1329  Spt-Mir-1329  Sto-Mir-1329  Xtr-Mir-1329 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030733.1: 119466129-119466189 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCAAGACCUAUCAAUCUAGUUGUAGGGGUACAGUGAUCAGGUUACGACGGAUUUCUGAAAUAACAGCCUCGUAGCUUGGUCACCAUAUCCAUAUGACUCAGAUAACAACACUGUUCUGU
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Structure
        10          20        30        40        50        60
UCUCAAGACCUAUCAAU-  -|  UG  G     CA               C  AUUUCUG 
                  CU AGU  UA GGGUA  GUGAUCAGGUUACGA GG       A
                  GA UCA  AU CCUAU  CACUGGUUCGAUGCU CC       A
UGUCUUGUCACAACAAUA  C^  GU  A     AC               -  GACAAUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-1329-P2_5p
mirBase accessionNone
Sequence 
0- UACAGUGAUCAGGUUACGACGGA -23
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Star sequence

Xla-Mir-1329-P2_3p*
mirBase accessionNone
Sequence 
39- CUCGUAGCUUGGUCACCAUAUC -61
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