MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-1329

Family name MIR-1329 (all species)
Seed ACAGUGA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1329-v1  Aca-Mir-1329-v2  Ami-Mir-1329  Bta-Mir-1329  Cli-Mir-1329-v1  Cli-Mir-1329-v2  Cmi-Mir-1329  Cpi-Mir-1329-v1  Cpi-Mir-1329-v2  Ebu-Mir-1329  Eca-Mir-1329  Gga-Mir-1329-v1  Gga-Mir-1329-v2  Gja-Mir-1329-v1  Gja-Mir-1329-v2  Laf-Mir-1329  Mdo-Mir-1329  Mmr-Mir-1329  Mun-Mir-1329  Neu-Mir-1329  Oan-Mir-1329-v1  Oan-Mir-1329-v2  Pbv-Mir-1329  Pma-Mir-1329  Sha-Mir-1329  Spt-Mir-1329  Tgu-Mir-1329-v1  Tgu-Mir-1329-v2  Xla-Mir-1329-P1  Xla-Mir-1329-P2  Xtr-Mir-1329 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01006039.1: 180058-180118 [+]
Precursor
(pre-Mir +30nt flank)
CUUCCCGGAAUGACAAUCUGGACACAUGGACACAGUGAUCAGGUUACGAUGGAUUAGAUCAAUAAGAGCCACAUAGCUUGGUCACGUUGUCCAUGUGUUCAGGAAAACUUCAAUCUUUGAA
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Structure
        10          20        30        40        50        60
CUUCCCGGAAUGACAAU--|              CA            CGA   AUUAGAU 
                   CUGGACACAUGGACA  GUGAUCAGGUUA   UGG       C
                   GACUUGUGUACCUGU  CACUGGUUCGAU   ACC       A
AAGUUUCUAACUUCAAAAG^              UG            AC-   GAGAAUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-1329_5p (predicted)
mirBase accessionNone
Sequence 
0- CACAGUGAUCAGGUUACGAUGGA -23
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Star sequence

Sto-Mir-1329_3p* (predicted)
mirBase accessionNone
Sequence 
40- ACAUAGCUUGGUCACGUUGUC -61
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