| MirGeneDB ID | Laf-Mir-1329 |
|---|---|
| Family name | MIR-1329 (all species) |
| Seed | ACAGUGA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-1329-v1 Aca-Mir-1329-v2 Ami-Mir-1329 Bta-Mir-1329 Cli-Mir-1329-v1 Cli-Mir-1329-v2 Cmi-Mir-1329 Cpi-Mir-1329-v1 Cpi-Mir-1329-v2 Ebu-Mir-1329 Eca-Mir-1329 Gga-Mir-1329-v1 Gga-Mir-1329-v2 Gja-Mir-1329-v1 Gja-Mir-1329-v2 Mdo-Mir-1329 Mmr-Mir-1329 Mun-Mir-1329 Neu-Mir-1329 Oan-Mir-1329-v1 Oan-Mir-1329-v2 Pbv-Mir-1329 Pma-Mir-1329 Sha-Mir-1329 Spt-Mir-1329 Sto-Mir-1329 Tgu-Mir-1329-v1 Tgu-Mir-1329-v2 Xla-Mir-1329-P1 Xla-Mir-1329-P2 Xtr-Mir-1329 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010047.1: 20519608-20519668 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGAAGGGGGAUCUUGGUUUGGUUUUAGGGGUACAGUGACCAGGUUACGAUGGAUUUCUCAAGUGAGAACCUCGUAGCUGGGUCACAAUAUCUGUAUGACUCCAUCUUCCCUCCCCCGUAUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 GGAAGGGGGAUCUUGGUUU--| U G CA A U AUUUCUC GGUU UA GGGUA GUGACC GGUUACGA GG A UCAG AU UCUAU CACUGG UCGAUGCU CC A UUAUGCCCCCUCCCUUCUACC^ U G AA G - AAGAGUG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-1329_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UACAGUGACCAGGUUACGAUGGA -23
Get sequence
|
| Star sequence | Laf-Mir-1329_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- CUCGUAGCUGGGUCACAAUAUC -61
Get sequence
|
