Mir-1329

MirGeneDB ID

Eca-Mir-1329

Family name

MIR-1329 (all species)

Seed

ACAGUGA

Species

Horse (Equus caballus)

MiRBase ID

Paralogues

Orthologues

Aca-Mir-1329-v1 Aca-Mir-1329-v2 Ami-Mir-1329 Bta-Mir-1329 Cli-Mir-1329-v1 Cli-Mir-1329-v2 Cmi-Mir-1329 Cpi-Mir-1329-v1 Cpi-Mir-1329-v2 Ebu-Mir-1329 Gga-Mir-1329-v1 Gga-Mir-1329-v2 Gja-Mir-1329-v1 Gja-Mir-1329-v2 Laf-Mir-1329 Mdo-Mir-1329 Mmr-Mir-1329 Mun-Mir-1329 Neu-Mir-1329 Oan-Mir-1329-v1 Oan-Mir-1329-v2 Pbv-Mir-1329 Pma-Mir-1329 Sha-Mir-1329 Spt-Mir-1329 Sto-Mir-1329 Tgu-Mir-1329-v1 Tgu-Mir-1329-v2 Xla-Mir-1329-P1 Xla-Mir-1329-P2 Xtr-Mir-1329

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(GCA_002863925.1_EquCab3.0)

CM009162.1: 84059751-84059811 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GAAGGCAGAAUCUCAGUCUGGUUGUAGGGGUACAGUGAUCAGGUUAUGAUGGAUUUCUCAAAUAACAACCUCGUAGCUUGGUCACGAUAUCCAUAUGACACAGAUGGCAACUGUUUUACUC

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Structure

        10         20         30        40        50        60
GAAGGCAGAAUCUCAGU-   -| UG  G     CA               U  AUUUCUC 
                  CUG GU  UA GGGUA  GUGAUCAGGUUAUGA GG       A
                  GAC CA  AU CCUAU  CACUGGUUCGAUGCU CC       A
CUCAUUUUGUCAACGGUA   A^ GU  A     AG               -  AACAAUA 
 .       110       100        90        80         70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er	Er

Mature sequence

Eca-Mir-1329_5p

mirBase accession

None

Sequence

0- UACAGUGAUCAGGUUAUGAUGGAU -24

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Star sequence

Eca-Mir-1329_3p*

mirBase accession

None

Sequence

38- CCUCGUAGCUUGGUCACGAUAUC -61

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