MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1329

Family name MIR-1329 (all species)
Seed ACAGUGA
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1329-v1  Aca-Mir-1329-v2  Ami-Mir-1329  Bta-Mir-1329  Cli-Mir-1329-v1  Cli-Mir-1329-v2  Cmi-Mir-1329  Cpi-Mir-1329-v1  Cpi-Mir-1329-v2  Ebu-Mir-1329  Gga-Mir-1329-v1  Gga-Mir-1329-v2  Gja-Mir-1329-v1  Gja-Mir-1329-v2  Laf-Mir-1329  Mdo-Mir-1329  Mmr-Mir-1329  Mun-Mir-1329  Neu-Mir-1329  Oan-Mir-1329-v1  Oan-Mir-1329-v2  Pbv-Mir-1329  Pma-Mir-1329  Sha-Mir-1329  Spt-Mir-1329  Sto-Mir-1329  Tgu-Mir-1329-v1  Tgu-Mir-1329-v2  Xla-Mir-1329-P1  Xla-Mir-1329-P2  Xtr-Mir-1329 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009162.1: 84059751-84059811 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGGCAGAAUCUCAGUCUGGUUGUAGGGGUACAGUGAUCAGGUUAUGAUGGAUUUCUCAAAUAACAACCUCGUAGCUUGGUCACGAUAUCCAUAUGACACAGAUGGCAACUGUUUUACUC
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Structure
        10         20         30        40        50        60
GAAGGCAGAAUCUCAGU-   -| UG  G     CA               U  AUUUCUC 
                  CUG GU  UA GGGUA  GUGAUCAGGUUAUGA GG       A
                  GAC CA  AU CCUAU  CACUGGUUCGAUGCU CC       A
CUCAUUUUGUCAACGGUA   A^ GU  A     AG               -  AACAAUA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-1329_5p
mirBase accessionNone
Sequence 
0- UACAGUGAUCAGGUUAUGAUGGAU -24
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Star sequence

Eca-Mir-1329_3p*
mirBase accessionNone
Sequence 
38- CCUCGUAGCUUGGUCACGAUAUC -61
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