MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-1329

Family name MIR-1329 (all species)
Seed ACGGUGA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1329-v1  Aca-Mir-1329-v2  Ami-Mir-1329  Bta-Mir-1329  Cli-Mir-1329-v1  Cli-Mir-1329-v2  Cmi-Mir-1329  Cpi-Mir-1329-v1  Cpi-Mir-1329-v2  Ebu-Mir-1329  Eca-Mir-1329  Gga-Mir-1329-v1  Gga-Mir-1329-v2  Gja-Mir-1329-v1  Gja-Mir-1329-v2  Laf-Mir-1329  Mdo-Mir-1329  Mun-Mir-1329  Neu-Mir-1329  Oan-Mir-1329-v1  Oan-Mir-1329-v2  Pbv-Mir-1329  Pma-Mir-1329  Sha-Mir-1329  Spt-Mir-1329  Sto-Mir-1329  Tgu-Mir-1329-v1  Tgu-Mir-1329-v2  Xla-Mir-1329-P1  Xla-Mir-1329-P2  Xtr-Mir-1329 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007668.1: 149861655-149861714 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGGUGGAAUCUCAGUCUGGUUGUAGGGGUACGGUGAUCACGUUGCGACAGUUUCUCAAGCGAUAGCCUCGUAGCUUGGUCACGAUAUCCGUAUGACACAGAUAGCUGCUAUUUCAUCC
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Structure
        10         20         30        40        50          
GAAGGUGGAAUCUCAGU-   -| UG  G     CG       C       CA  UUCUCA 
                  CUG GU  UA GGGUA  GUGAUCA GUUGCGA  GU      \
                  GAC CA  AU CCUAU  CACUGGU CGAUGCU  CG      A
CCUACUUUAUCGUCGAUA   A^ GU  G     AG       U       C-  AUAGCG 
.       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-1329_5p

mirBase accessionNone
Sequence
0- UACGGUGAUCACGUUGCGACAGU -23
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Star sequence

Mmr-Mir-1329_3p* (predicted)

mirBase accessionNone
Sequence
37- CCUCGUAGCUUGGUCACGAUAUC -60
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