| MirGeneDB ID | Bta-Mir-378 |
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| Family name |
MIR-378 (all species) |
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| Seed |
CUGGACU |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-378-1
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| Paralogues |
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| Orthologues |
Cfa-Mir-378
Cja-Mir-378
Cpo-Mir-378
Dno-Mir-378
Eca-Mir-378
Ete-Mir-378
Hsa-Mir-378
Laf-Mir-378
Mml-Mir-378
Mmr-Mir-378-P1
Mmr-Mir-378-P2
Mmr-Mir-378-P3
Mmu-Mir-378
Ocu-Mir-378
Pab-Mir-378
Rno-Mir-378
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037334.1: 61076257-61076316 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAGCCAGUGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUCGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCGCCUUCCCCACUCUCUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCAGCCAGUGGGUGACA- G-| C G C U GUUACC
GA CCAC CAGG CU CUGACUCCAGGUCC GUGU U
CU GGUG GUCC GA GACUGAGGUUCAGG CACG C
GGUCUCUCACCCCUUCCG GA^ A G A U AUAAAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-378_5p* |
| mirBase accession | None |
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| Sequence |
0- CUCCUGACUCCAGGUCCUGUGU -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-378_3p |
| mirBase accession | MIMAT0009305 |
|---|
| Sequence |
38- ACUGGACUUGGAGUCAGAAGGC -60
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-378
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