MirGeneDB ID | Mmr-Mir-378-P2 |
Family name |
MIR-378 (all species) |
Seed |
CUGGACU |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
Mmr-Mir-378-P1
Mmr-Mir-378-P3
|
Orthologues |
Bta-Mir-378
Cfa-Mir-378
Cja-Mir-378
Cpo-Mir-378
Dno-Mir-378
Eca-Mir-378
Ete-Mir-378
Hsa-Mir-378
Laf-Mir-378
Mml-Mir-378
Mmu-Mir-378
Ocu-Mir-378
Pab-Mir-378
Rno-Mir-378
|
Node of Origin (locus) |
M. murinus
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007676.1: 18919227-18919312 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UACCCCUCACCCCACCCCCACCCCCAGCAUCCUCUGGGCUCUCCCAGUCCAGGCGGUACCCUCAGAGAGGCAGCUCUGGUGUAGAGAAAGGAGCACUGGACUUGGAGUCAGAAGACCUGAGUGUGACCCCCAGCCCAGCCCUUAUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70
UACCCCUCACCCCACCCC---| CCC CA C GCU C - GGUACCCUCAGAGAGGCA
CAC CAG UC UCUGG CUCC AGUCCAG GC G
GUG GUC AG AGACU GAGG UCAGGUC CG C
AUAUUCCCGACCCGACCCCCA^ UGA C- A --- U A AGGAAAGAGAUGUGGUCU
140 130 120 110 100 90 80 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mmr-Mir-378-P2_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CCUCUGGGCUCUCCCAGUCCAGGC -24
Get sequence
|
Mature sequence |
Mmr-Mir-378-P2_3p |
mirBase accession | None |
Sequence |
64- ACUGGACUUGGAGUCAGAAGAC -86
Get sequence
|