MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-378

Family name MIR-378 (all species)
Seed CUGGACU
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-378a
Paralogues
Orthologues Bta-Mir-378  Cfa-Mir-378  Cja-Mir-378  Cpo-Mir-378  Dno-Mir-378  Eca-Mir-378  Ete-Mir-378  Hsa-Mir-378  Laf-Mir-378  Mml-Mir-378  Mmr-Mir-378-P1  Mmr-Mir-378-P2  Mmr-Mir-378-P3  Mmu-Mir-378  Ocu-Mir-378  Pab-Mir-378 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr18: 56726152-56726211 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAGCCAGGGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUCGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCACCUUCCCCGCUCUCUGG
Get precursor sequence
Structure
        10         20         30        40        50         
UCAGCCAGGGGGUGACA-  G-|   C    G  C              U    GUUACC 
                  GA  CCAC CAGG CU CUGACUCCAGGUCC GUGU      U
                  CU  GGUG GUCC GA GACUGAGGUUCAGG CACG      C
GGUCUCUCGCCCCUUCCA  GA^   A    G  A              U    AUAAAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-378_5p*
mirBase accessionMIMAT0003378
Sequence 
0- CUCCUGACUCCAGGUCCUGUGU -22
Get sequence
Proposed targets microrna.org: MIMAT0003378
TargetScanVert: rno-miR-378a-5p
miRDB: MIMAT0003378
Mature sequence

Rno-Mir-378_3p
mirBase accessionMIMAT0003379
Sequence 
38- ACUGGACUUGGAGUCAGAAGGC -60
Get sequence
Proposed targets microrna.org: MIMAT0003379
TargetScanVert: rno-miR-378a-3p
miRDB: MIMAT0003379