MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-378-P3

Family name MIR-378 (all species)
Seed CUGGACU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-378-P1  Mmr-Mir-378-P2 
Orthologues Bta-Mir-378  Cfa-Mir-378  Cja-Mir-378  Cpo-Mir-378  Dno-Mir-378  Eca-Mir-378  Ete-Mir-378  Hsa-Mir-378  Laf-Mir-378  Mml-Mir-378  Mmu-Mir-378  Ocu-Mir-378  Pab-Mir-378  Rno-Mir-378 
Node of Origin (locus) M. murinus
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007670.1: 77215641-77215697 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCUUGAGCUAUGGGAUGUCCCAUAUUGGCUUUUAUUCCACUGUCAGUGACUGACUAAGAGAGCACUGGACUUGGAGUCAGAAGUCAUGAGGCUCCUAUCCCAGCUUUGCCACUAA
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Structure
        10             20        30         40        50       
GCCCUUGAGCUAUGGGAU-----|  C  UAU        -      CUG      ACUGAC 
                       GUC CA   UGGCUUUU AUUCCA   UCAGUG      U
                       CGG GU   ACUGAAGA UGAGGU   GGUCAC      A
AAUCACCGUUUCGACCCUAUCCU^  A  ---        C      UCA      GAGAGA 
     110       100        90           80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-378-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- CUUUUAUUCCACUGUCAGUGA -21
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Mature sequence

Mmr-Mir-378-P3_3p

mirBase accessionNone
Sequence
35- ACUGGACUUGGAGUCAGAAGUC -57
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