MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-378

Family name MIR-378 (all species)
Seed CUGGACU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-378a
Paralogues
Orthologues Bta-Mir-378  Cfa-Mir-378  Cpo-Mir-378  Dno-Mir-378  Ete-Mir-378  Mml-Mir-378  Mmu-Mir-378  Ocu-Mir-378  Rno-Mir-378 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr5: 149732829-149732888 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCCAGAGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUAGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCACCUUCCCCACUCUCUGG
Get precursor sequence
Structure
        10         20         30        40        50         
GCAGCCAGAGGGUGACA-  G-|   C    G  C              U    GUUACC 
                  GA  CCAC CAGG CU CUGACUCCAGGUCC GUGU      U
                  CU  GGUG GUCC GA GACUGAGGUUCAGG CACG      A
GGUCUCUCACCCCUUCCA  GA^   A    G  A              U    AUAAAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-378_5p*

mirBase accessionMIMAT0000731
Sequence
0- CUCCUGACUCCAGGUCCUGUGU -22
Get sequence
Proposed targets microrna.org: MIMAT0000731
TargetScanVert: hsa-miR-378a-5p
TargetMiner: hsa-miR-378a-5p
miRDB: MIMAT0000731
Mature sequence

Hsa-Mir-378_3p

mirBase accessionMIMAT0000732
Sequence
38- ACUGGACUUGGAGUCAGAAGGC -60
Get sequence
Proposed targets microrna.org: MIMAT0000732
TargetScanVert: hsa-miR-378a-3p
TargetMiner: hsa-miR-378a-3p
miRDB: MIMAT0000732