Mir-378

MirGeneDB ID

Ocu-Mir-378

Family name

MIR-378 (all species)

Seed

CUGGACU

Species

Rabbit (Oryctolagus cuniculus)

MiRBase ID

ocu-mir-378

Paralogues

Orthologues

Bta-Mir-378 Cfa-Mir-378 Cja-Mir-378 Cpo-Mir-378 Dno-Mir-378 Eca-Mir-378 Ete-Mir-378 Hsa-Mir-378 Laf-Mir-378 Mml-Mir-378 Mmr-Mir-378-P1 Mmr-Mir-378-P2 Mmr-Mir-378-P3 Mmu-Mir-378 Pab-Mir-378 Rno-Mir-378

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(oryCun2_add)

chr3: 31535185-31535244 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCAGCCAGCGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUCGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCGUCUAACCCACUCUCUGG

Get precursor sequence

Structure

        10         20         30        40        50         
GCAGCCAGCGGGUGACA-  G-|   C    G  C              U    GUUACC 
                  GA  CCAC CAGG CU CUGACUCCAGGUCC GUGU      U
                  CU  GGUG GUCC GA GACUGAGGUUCAGG CACG      C
GGUCUCUCACCCAAUCUG  GA^   A    G  A              U    AUAAAG 
.       110       100        90        80        70        60