| MirGeneDB ID | Bta-Mir-504-v2 |
|---|---|
| Family name | MIR-504 (all species) |
| Seed | ACCCUGG |
| Species | Cow (Bos taurus) |
| MiRBase ID | bta-mir-504 |
| Paralogues | Bta-Mir-504-v1 |
| Orthologues | Cfa-Mir-504-v2 Cja-Mir-504-v2 Cpo-Mir-504-v2 Dno-Mir-504-v2 Eca-Mir-504-v2 Ete-Mir-504-v2 Hsa-Mir-504-v2 Laf-Mir-504 Mml-Mir-504-v2 Mmr-Mir-504-v2 Mmu-Mir-504-v2 Ocu-Mir-504-v2 Pab-Mir-504-v2 Rno-Mir-504-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 22089372-22089428 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-504-v2) |
Mir-504-v1
NC_037357.1: 22089371-22089429 [-]
UCSC
Ensembl
Mir-504-v2 NC_037357.1: 22089372-22089428 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGUGGAACGUUGACGAGGCUGCUGUUGGGAGACCCUGGUCUGCACUCUGUCUGUAUGCUUACUGAAGGGAGCGCAGGGCAGGGUUUCCCAUACAGAGGGCACAGGCAACCACUGCAUGet precursor sequence |
| Structure | 10 20 30 40 50 AGUGGAACGUUGACGAGG- G - G A G-| UGUAU CU CUGU UGGGAGACCCUG UCUGC CUCU UC G GG GACA ACCCUUUGGGAC GGACG GAGG AG C UACGUCACCAACGGACACG A U G C GA^ UCAUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Bta-Mir-504-v2_5p |
| mirBase accession | MIMAT0009340 |
| Sequence |
0- GACCCUGGUCUGCACUCUGUCU -22
Get sequence
|
| Proposed targets |
TargetScanVert: bta-miR-504 |
| Star sequence | Bta-Mir-504-v2_3p* |
| mirBase accession | None |
| Sequence |
35- AGGGAGCGCAGGGCAGGGUUUC -57
Get sequence
|
