| MirGeneDB ID | Laf-Mir-504 |
|---|---|
| Family name | MIR-504 (all species) |
| Seed | GACCCUG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-504-v1 Bta-Mir-504-v2 Cfa-Mir-504-v1 Cfa-Mir-504-v2 Cja-Mir-504-v1 Cja-Mir-504-v2 Cpo-Mir-504-v1 Cpo-Mir-504-v2 Dno-Mir-504-v1 Dno-Mir-504-v2 Eca-Mir-504-v1 Eca-Mir-504-v2 Ete-Mir-504-v1 Ete-Mir-504-v2 Hsa-Mir-504-v1 Hsa-Mir-504-v2 Mml-Mir-504-v1 Mml-Mir-504-v2 Mmr-Mir-504-v1 Mmr-Mir-504-v2 Mmu-Mir-504-v1 Mmu-Mir-504-v2 Ocu-Mir-504-v1 Ocu-Mir-504-v2 Pab-Mir-504-v1 Pab-Mir-504-v2 Rno-Mir-504-v1 Rno-Mir-504-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010116.1: 2513706-2513765 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUGUGAAGUGAUGAAUCUGCUGCUGUUGGGAGACCCUGGUCUGCACUCUUAUCUGUAUGCUUACUGAGGGGAGAGCAGGGCAGGGUUUCCCAUACAGAGGGCACAGGCUACCACCUGUGGGet precursor sequence |
| Structure | 10 20 30 40 50 AUGUGAAGUGAUGAAUCU G- -| G A UA UGUAU GCU CUGU UGGGAGACCCUG UCUGC CUCU UC G CGG GACA ACCCUUUGGGAC GGACG GAGG AG C GGUGUCCACCAUCGGACA GA U^ G A GG UCAUU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Laf-Mir-504_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AGACCCUGGUCUGCACUCUUAUC -23
Get sequence
|
| Star sequence | Laf-Mir-504_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- GGGGAGAGCAGGGCAGGGUUUCC -60
Get sequence
|
