MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-504-v1

Family name MIR-504 (all species)
Seed GACCCUG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-504
Paralogues Mml-Mir-504-v2 
Orthologues Bta-Mir-504-v1  Cfa-Mir-504-v1  Cja-Mir-504-v1  Cpo-Mir-504-v1  Dno-Mir-504-v1  Eca-Mir-504-v1  Ete-Mir-504-v1  Hsa-Mir-504-v1  Laf-Mir-504  Mmr-Mir-504-v1  Mmu-Mir-504-v1  Ocu-Mir-504-v1  Pab-Mir-504-v1  Rno-Mir-504-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014356.1: 134821900-134821958 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-504-v1)		 Mir-504-v1 CM014356.1: 134821900-134821958 [-] UCSC Ensembl
Mir-504-v2 CM014356.1: 134821901-134821957 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUGGAAUGUUGAAUCAGCUGCUGUUGGGAGACCCUGGUCUGCACUCUAUCUGUAUUCUUACUGAAGGGAGCGCAGGGCAGGGUUUCCCAUACAGAGGGCACAGACUACCACCGUAUG
Get precursor sequence
Structure
        10        20          30        40        50         
GAGUGGAAUGUUGAAUCA   G-    -            G     A    A-| UGUAU 
                  GCU  CUGU UGGGAGACCCUG UCUGC CUCU  UC     U
                  CGG  GACA ACCCUUUGGGAC GGACG GAGG  AG     C
GUAUGCCACCAUCAGACA   GA    U            G     C    GA^ UCAUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-504-v1_5p
mirBase accessionMIMAT0006368
Sequence 
0- AGACCCUGGUCUGCACUCUAUC -22
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Proposed targets TargetScanVert: mml-miR-504-5p
Star sequence

Mml-Mir-504-v1_3p*
mirBase accessionMIMAT0026891
Sequence 
37- GGGAGCGCAGGGCAGGGUUUCC -59
Get sequence
Proposed targets TargetScanVert: mml-miR-504-3p