MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-504-v1

Family name MIR-504 (all species)
Seed GACCCUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-504
Paralogues Dno-Mir-504-v2 
Orthologues Bta-Mir-504-v1  Cfa-Mir-504-v1  Cja-Mir-504-v1  Cpo-Mir-504-v1  Eca-Mir-504-v1  Ete-Mir-504-v1  Hsa-Mir-504-v1  Laf-Mir-504  Mml-Mir-504-v1  Mmr-Mir-504-v1  Mmu-Mir-504-v1  Ocu-Mir-504-v1  Pab-Mir-504-v1  Rno-Mir-504-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH582387: 296732-296790 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-504-v1)		 Mir-504-v1 JH582387: 296732-296790 [+] UCSC Ensembl
Mir-504-v2 JH582387: 296733-296789 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUGGAAUGUUGAAUCAGCUGCUGUUGGGAGACCCUGGCCUGCACUCUGUCUGUAUGUUUAUUGAAGGGAGCGCAGGGCAGGGUUUCCCAUACAGAGGGCGCAGGCUACCACCAUGCG
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Structure
        10        20          30        40        50         
GAGUGGAAUGUUGAAUCA   G-    -            G     A    G-| UGUAU 
                  GCU  CUGU UGGGAGACCCUG CCUGC CUCU  UC     G
                  CGG  GACA ACCCUUUGGGAC GGACG GAGG  AG     U
GCGUACCACCAUCGGACG   GA    U            G     C    GA^ UUAUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Dno-Mir-504-v1_5p
mirBase accessionMIMAT0047946
Sequence 
0- AGACCCUGGCCUGCACUCUGUC -22
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Star sequence

Dno-Mir-504-v1_3p* (predicted)
mirBase accessionMIMAT0047947
Sequence 
37- GGGAGCGCAGGGCAGGGUUUCC -59
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