| MirGeneDB ID | Cja-Mir-103-P1 |
|---|---|
| Family name | MIR-103 (all species) |
| Seed | GCAGCAU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-103-P2 Cja-Mir-103-P4 |
| Orthologues | Aca-Mir-103-P1 Ami-Mir-103-P1 Bta-Mir-103-P1 Cfa-Mir-103-P1 Cli-Mir-103-P1 Cmi-Mir-103-P1 Cpi-Mir-103-P1 Cpo-Mir-103-P1 Dno-Mir-103-P1 Dre-Mir-103-P1a Dre-Mir-103-P1b Eca-Mir-103-P1 Ete-Mir-103-P1 Gga-Mir-103-P1 Gja-Mir-103-P1 Hmi-Mir-103 Hsa-Mir-103-P1 Laf-Mir-103-P1 Lch-Mir-103-P1 Loc-Mir-103-P1 Mal-Mir-103-P1a Mdo-Mir-103-P1 Mml-Mir-103-P1 Mmr-Mir-103-P1 Mmu-Mir-103-P1 Mun-Mir-103-P1 Oan-Mir-103-P1 Ocu-Mir-103-P1 Pab-Mir-103-P1 Pbv-Mir-103-P1 Pfl-Mir-103 Pma-Mir-103-o1 Pmi-Mir-103 Rno-Mir-103-P1 Sha-Mir-103-P1 Sko-Mir-103 Spt-Mir-103-P1 Spu-Mir-103 Sro-Mir-103 Sto-Mir-103-P1 Tgu-Mir-103-P1 Tni-Mir-103-P1a Xbo-Mir-103 Xla-Mir-103-P1c Xla-Mir-103-P1d Xtr-Mir-103-P1 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021926.1: 78925309-78925369 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACUUGCAAUAUUCGAUAUUCUCUCUGCUUUCAGCUUCUUUACAGUGUUGCCUUGUGGCAUGGAGUUCAAGCAGCAUUGUACAGGGCUAUCAAAGCACAGAGAGCUUGCUACAGUCAAGGCCGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACUUGCAAUAUUCGAUA- C C--| U U C UGGCA UUCUCU UGCUUU AGCU CU UACAGUGUUGC UUG U GAGAGA ACGAAA UCGG GA AUGUUACGACG AAC G CCGGAACUGACAUCGUUC C CUA^ - C - UUGAG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-103-P1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAGCUUCUUUACAGUGUUGCCUUG -24
Get sequence
|
| Mature sequence | Cja-Mir-103-P1_3p |
| mirBase accession | None |
| Sequence |
38- AGCAGCAUUGUACAGGGCUAUCA -61
Get sequence
|
