MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-103-P1d

Family name MIR-103 (all species)
Seed GCAGCAU
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-107
Paralogues Xla-Mir-103-P1c  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xla-Mir-103-P4 
Orthologues Aca-Mir-103-P1  Ami-Mir-103-P1  Bta-Mir-103-P1  Cfa-Mir-103-P1  Cja-Mir-103-P1  Cli-Mir-103-P1  Cmi-Mir-103-P1  Cpi-Mir-103-P1  Cpo-Mir-103-P1  Dno-Mir-103-P1  Eca-Mir-103-P1  Ete-Mir-103-P1  Gga-Mir-103-P1  Gja-Mir-103-P1  Hmi-Mir-103  Hsa-Mir-103-P1  Laf-Mir-103-P1  Lch-Mir-103-P1  Loc-Mir-103-P1  Mdo-Mir-103-P1  Mml-Mir-103-P1  Mmr-Mir-103-P1  Mmu-Mir-103-P1  Mun-Mir-103-P1  Oan-Mir-103-P1  Ocu-Mir-103-P1  Pab-Mir-103-P1  Pbv-Mir-103-P1  Pfl-Mir-103  Pma-Mir-103-o1  Pmi-Mir-103  Rno-Mir-103-P1  Sha-Mir-103-P1  Sko-Mir-103  Spt-Mir-103-P1  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P1  Tgu-Mir-103-P1  Xbo-Mir-103  Xtr-Mir-103-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030737.1: 24751990-24752049 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCAUUUGAGAUGUAAUCUUUUUGCUUUCAGCUUCUUUACAGUGUUGCCUUGUGGCAUGGAGUUCAAGCAGCAUUGUACAGGGCUAUCAAAGCAUUAAGAACUGCAACAUGAUCCACUG
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Structure
        10          20        30          40        50         
GUCCAUUUGAGAUGUAA--    UU      C--|   U  U           C   UGGCA 
                   UCUU  UGCUUU   AGCU CU UACAGUGUUGC UUG     U
                   AGAA  ACGAAA   UCGG GA AUGUUACGACG AAC     G
GUCACCUAGUACAACGUCA    UU      CUA^   -  C           -   UUGAG 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Star sequence

Xla-Mir-103-P1d_5p*
mirBase accessionMIMAT0046420
Sequence 
0- AGCUUCUUUACAGUGUUGCCUUG -23
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Mature sequence

Xla-Mir-103-P1d_3p
mirBase accessionMIMAT0046421
Sequence 
37- AGCAGCAUUGUACAGGGCUAUCA -60
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