MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-103-P1a

Family name MIR-103 (all species)
Seed GCAGCAU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-103-P2a  Mal-Mir-103-P2b 
Orthologues Aca-Mir-103-P1  Ami-Mir-103-P1  Bta-Mir-103-P1  Cfa-Mir-103-P1  Cja-Mir-103-P1  Cli-Mir-103-P1  Cmi-Mir-103-P1  Cpi-Mir-103-P1  Cpo-Mir-103-P1  Dno-Mir-103-P1  Dre-Mir-103-P1a  Eca-Mir-103-P1  Ete-Mir-103-P1  Gga-Mir-103-P1  Gja-Mir-103-P1  Hmi-Mir-103  Hsa-Mir-103-P1  Laf-Mir-103-P1  Lch-Mir-103-P1  Loc-Mir-103-P1  Mdo-Mir-103-P1  Mml-Mir-103-P1  Mmr-Mir-103-P1  Mmu-Mir-103-P1  Mun-Mir-103-P1  Oan-Mir-103-P1  Ocu-Mir-103-P1  Pab-Mir-103-P1  Pbv-Mir-103-P1  Pfl-Mir-103  Pma-Mir-103-o1  Pmi-Mir-103  Rno-Mir-103-P1  Sha-Mir-103-P1  Sko-Mir-103  Spt-Mir-103-P1  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P1  Tgu-Mir-103-P1  Tni-Mir-103-P1a  Xbo-Mir-103  Xtr-Mir-103-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884740.1: 2105509-2105568 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAUUUUCUGGAGACUUUCUGUGUGCAGUGAGCUUCUUUACAGUGUUGCCUUGUGGCAUGGCGAUCAAGCAGCAUUGUACAGGGCUAUCACUGCAUACAGGGCUGCAGCGGAGAUGCACA
Get precursor sequence
Structure
        10          20        30          40        50         
UUAUUUUCUGGAGACUU--              --|  U  U           C   UGGCA 
                   UCUGUGUGCAGUGA  GCU CU UACAGUGUUGC UUG     U
                   GGACAUACGUCACU  CGG GA AUGUUACGACG AAC     G
ACACGUAGAGGCGACGUCG              AU^  -  C           -   UAGCG 
.       110       100        90         80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-103-P1a_5p*
mirBase accessionNone
Sequence 
0- AGCUUCUUUACAGUGUUGCCUUG -23
Get sequence
Mature sequence

Mal-Mir-103-P1a_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUCA -60
Get sequence