MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-103-P2a

Family name MIR-103 (all species)
Seed GCAGCAU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-103-P1a  Mal-Mir-103-P2b 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Xbo-Mir-103  Xtr-Mir-103-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884752.1: 495213-495272 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCCUGCUCGCUGUUUCCUCUUUGCAUUCAGCCUCUUUACGGUGCUGCCUUGUGGCAUCUUGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCAUAGAGGAGGUAAACUGCUUUACUGU
Get precursor sequence
Structure
        10          20        30          40        50         
GUGCCUGCUCGCUGUUU--     U   A   --|   U  U           C   UGGCA 
                   CCUCU UGC UUC  AGCC CU UACGGUGCUGC UUG     U
                   GGAGA ACG AAG  UCGG GA AUGUUACGACG AAC     C
UGUCAUUUCGUCAAAUGGA     U   G   UA^   -  C           -   UAGUU 
.       110       100        90         80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-103-P2a_5p*
mirBase accessionNone
Sequence 
0- AGCCUCUUUACGGUGCUGCCUUG -23
Get sequence
Mature sequence

Mal-Mir-103-P2a_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
Get sequence