MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-103-P2

Family name MIR-103 (all species)
Seed GCAGCAU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-107
Paralogues Ami-Mir-103-P1  Ami-Mir-103-P4 
Orthologues Aca-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xbo-Mir-103  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xtr-Mir-103-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017712067.1: 5130272-5130331 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CAGUGGUGUAUCUCUGAGCUCUGUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUUGCAUUUAUGUCAAGCAGCAUUGUACAGGGCUAUGAAAGAACAGAGACCUGUUCUUCACUUCAUUC
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Structure
        10          20        30          40        50         
CAGUGGUGUAUCUCUGAG--      G     --|   U  U           C   UUGCA 
                    CUCUGU CUUUC  AGCU CU UACAGUGCUGC UUG     U
                    GAGACA GAAAG  UCGG GA AUGUUACGACG AAC     U
CUUACUUCACUUCUUGUCCA      A     UA^   -  C           -   UGUAU 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ami-Mir-103-P2_5p*
mirBase accessionMIMAT0038121
Sequence 
0- AGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Ami-Mir-103-P2_3p
mirBase accessionMIMAT0038122
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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