MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-103-P2b

Family name MIR-103 (all species)
Seed GCAGCAU
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-103-P1a  Dre-Mir-103-P1b  Dre-Mir-103-P2a 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2b  Xbo-Mir-103  Xtr-Mir-103-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr14: 44827467-44827526 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUGCACAGAUGAUUUACUCUUGGCUUUGAGCCUCUUUACAAUGCUGCCUUGUAGACCCAGAAUCAAGCAGCAUUGUACAGGGCUAUGAAAGCACAGAGACACACUUCCAUAUCAGACC
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Structure
        10          20        30          40        50         
UCAUGCACAGAUGAUUUA--    UG     G--|   U  U           C   UAGAC 
                    CUCU  GCUUU   AGCC CU UACAAUGCUGC UUG     C
                    GAGA  CGAAA   UCGG GA AUGUUACGACG AAC     C
CCAGACUAUACCUUCACACA    CA     GUA^   -  C           -   UAAGA 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-103-P2b_5p*
mirBase accessionNone
Sequence 
0- AGCCUCUUUACAAUGCUGCCUUG -23
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Mature sequence

Dre-Mir-103-P2b_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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