MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-103-P2

Family name MIR-103 (all species)
Seed GCAGCAU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-103-P1  Loc-Mir-103-P4 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xbo-Mir-103  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xtr-Mir-103-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LepOcu1)		 LG4: 4457264-4457323 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUGGAGGGGUGAUUUGCUCUUUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUAGAAUCCUUAUCAAGCAGCAUUGUACAGGGCUAUGACAGCACAGAGACCUGCUUCAAAAUGGCAUU
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Structure
        10          20        30          40        50         
AAAUGGAGGGGUGAUUUG--    U    U  --|   U  U           C   UAGAA 
                    CUCU UGCU UC  AGCU CU UACAGUGCUGC UUG     U
                    GAGA ACGA AG  UCGG GA AUGUUACGACG AAC     C
UUACGGUAAAACUUCGUCCA    C    C  UA^   -  C           -   UAUUC 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-103-P2_5p*
mirBase accessionNone
Sequence 
0- AGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Loc-Mir-103-P2_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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