MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-103-P2b

Family name MIR-103 (all species)
Seed GCAGCAU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-103-P1a  Mal-Mir-103-P2a 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2b  Xbo-Mir-103  Xtr-Mir-103-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884932.1: 147066-147125 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCACCACCACCGCCCUGCUCUACGCUUUUAGCCUCUUUACAGUGCUGCCUUGUCUGAUCAUGUUCAAGCAGCAUUGUACAGGGCUAUGACAGCAUAGAGAGCUGCUCGGCCAGGCGCUG
Get precursor sequence
Structure
        10          20          30        40        50         
AUCACCACCACCGCCCUG--     C   UU--|    U  U           C   UCUGA 
                    CUCUA GCU    UAGCC CU UACAGUGCUGC UUG     U
                    GAGAU CGA    AUCGG GA AUGUUACGACG AAC     C
GUCGCGGACCGGCUCGUCGA     A   CAGU^    -  C           -   UUGUA 
.       110       100        90         80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-103-P2b_5p*
mirBase accessionNone
Sequence 
0- AGCCUCUUUACAGUGCUGCCUUG -23
Get sequence
Mature sequence

Mal-Mir-103-P2b_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
Get sequence