MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-103-P2b

Family name MIR-103 (all species)
Seed GCAGCAU
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-103-2
Paralogues Gmo-Mir-103-P2a 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2b  Xbo-Mir-103  Xtr-Mir-103-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig394168: 1003-1060 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCGGACAUGUCUUUUGCUCUACGCUUUUAGCCUCUUUACAGUGCUGCCUUGUCGAGUUGUUCAAGCAGCAUUGUACAGGGCUAUGACAGCGUCGAGCGCCCCUCUCCCCUCGGGCC
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Structure
        10          20          30        40        50        
UGGCGGACAUGUCUUUU--    U     UU--|    U  U           C   UCGA 
                   GCUC ACGCU    UAGCC CU UACAGUGCUGC UUG    G
                   CGAG UGCGA    AUCGG GA AUGUUACGACG AAC    U
CCGGGCUCCCCUCUCCCCG    C     CAGU^    -  C           -   UUGU 
      110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-103-P2b_5p*
mirBase accessionMIMAT0044049
Sequence 
0- AGCCUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Gmo-Mir-103-P2b_3p
mirBase accessionMIMAT0044050
Sequence 
35- AGCAGCAUUGUACAGGGCUAUGA -58
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