MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-490

Family name MIR-490 (all species)
Seed AACCUGG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-490
Paralogues
Orthologues Aca-Mir-490  Ami-Mir-490  Bta-Mir-490  Cfa-Mir-490  Cja-Mir-490  Cli-Mir-490  Cpi-Mir-490  Dno-Mir-490  Eca-Mir-490  Ete-Mir-490  Gga-Mir-490  Gja-Mir-490  Hsa-Mir-490  Laf-Mir-490  Mdo-Mir-490  Mml-Mir-490  Mmr-Mir-490  Mmu-Mir-490  Neu-Mir-490  Oan-Mir-490  Ocu-Mir-490  Pab-Mir-490  Pbv-Mir-490  Rno-Mir-490  Sha-Mir-490  Spt-Mir-490  Tgu-Mir-490 
Node of Origin (locus) Amniota
Node of Origin (family) Amniota
Genome context
(cavPor3)		 scaffold_10: 11766914-11766973 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UCGCUGGUGUGGAAAGUUCAUUGUUCGGCACCAUGGAUCUCCAGGUGGGUCACGGUUAGAAAUACACCAACCUGGAGGACUCCAUGCUGUCGAGCUGUUCAUGAGCAGCGGACACUUCCA
Get precursor sequence
Structure
        10        20           30          40        50        
UCGCUGGUGUGGAAAGUUCAUU---        C      --|        G   CACGGUU 
                         GUUCGGCA CAUGGA  UCUCCAGGU GGU       \
                         CGAGCUGU GUACCU  GGAGGUCCA CCA       A
ACCUUCACAGGCGACGAGUACUUGU        C      CA^        A   CAUAAAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-490_5p*
mirBase accessionMIMAT0047283
Sequence 
0- CCAUGGAUCUCCAGGUGGGU -20
Get sequence
Mature sequence

Cpo-Mir-490_3p
mirBase accessionMIMAT0047284
Sequence 
37- CAACCUGGAGGACUCCAUGCUGU -60
Get sequence