MirGeneDB ID | Mml-Mir-490 |
Family name |
MIR-490 (all species) |
Seed |
AACCUGG |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-490
|
Paralogues |
|
Orthologues |
Aca-Mir-490
Ami-Mir-490
Bta-Mir-490
Cfa-Mir-490
Cja-Mir-490
Cli-Mir-490
Cpi-Mir-490
Cpo-Mir-490
Dno-Mir-490
Eca-Mir-490
Ete-Mir-490
Gga-Mir-490
Gja-Mir-490
Hsa-Mir-490
Laf-Mir-490
Mdo-Mir-490
Mmr-Mir-490
Mmu-Mir-490
Neu-Mir-490
Oan-Mir-490
Ocu-Mir-490
Pab-Mir-490
Pbv-Mir-490
Rno-Mir-490
Sha-Mir-490
Spt-Mir-490
Tgu-Mir-490
|
Node of Origin (locus) |
Amniota
|
Node of Origin (family) |
Amniota
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014338.1: 163327430-163327489 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUGCUGGUUUGGAAAGUUCAUUGUUCGACACCAUGGAUCUCCAGGUGGGUCAAGUUUAGAGAUGCACCAACCUGGAGGACUCCAUGCUGUUGAGCUGUUCACAAGCAGCGGACACUUCCA
Get precursor sequence
|
Structure | 10 20 30 40 50
UUGCUGGUUUGGAAAGUUCAUU--- C --| G CAAGUUU
GUUCGACA CAUGGA UCUCCAGGU GGU \
CGAGUUGU GUACCU GGAGGUCCA CCA A
ACCUUCACAGGCGACGAACACUUGU C CA^ A CGUAGAG
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-490_5p* |
mirBase accession | MIMAT0006350 |
Sequence |
0- CCAUGGAUCUCCAGGUGGGU -20
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-490-5p
|
Mature sequence |
Mml-Mir-490_3p |
mirBase accession | MIMAT0006351 |
Sequence |
37- CAACCUGGAGGACUCCAUGCUGU -60
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-490-3p
|