MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-490

Family name MIR-490 (all species)
Seed AACCUGG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Aca-Mir-490  Ami-Mir-490  Bta-Mir-490  Cfa-Mir-490  Cja-Mir-490  Cli-Mir-490  Cpi-Mir-490  Cpo-Mir-490  Dno-Mir-490  Eca-Mir-490  Gga-Mir-490  Gja-Mir-490  Hsa-Mir-490  Laf-Mir-490  Mdo-Mir-490  Mml-Mir-490  Mmr-Mir-490  Mmu-Mir-490  Neu-Mir-490  Oan-Mir-490  Ocu-Mir-490  Pab-Mir-490  Pbv-Mir-490  Rno-Mir-490  Sha-Mir-490  Spt-Mir-490  Tgu-Mir-490 
Node of Origin (locus) Amniota
Node of Origin (family) Amniota
Genome context
(echTel2)		 JH980321: 29203809-29203868 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UUGAUGGUUUACAAAUUACGUGGUUCGACACCAUGGAUCUCCAGGUGGGUCCGAGAUAGAUGCACACCAACCUGGUGGACUCCAUGCUGUUGAGCUAUUCACAAGCAGCGAUGCUUCCUU
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Structure
        10           20        30         40         50        
UUGAUGGUUUACAAAUUAC---           C      -   -|     G   CCGAGAU 
                      GUGGUUCGACA CAUGGA UCU CCAGGU GGU       \
                      UAUCGAGUUGU GUACCU AGG GGUCCA CCA       A
UUCCUUCGUAGCGACGAACACU           C      C   U^     A   CACGUAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-490_5p*
mirBase accessionNone
Sequence 
0- CCAUGGAUCUCCAGGUGGGU -20
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Mature sequence

Ete-Mir-490_3p
mirBase accessionNone
Sequence 
37- CAACCUGGUGGACUCCAUGCUGU -60
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