MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-29-P2d2

Family name MIR-29 (all species)
Seed AGCACCA
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-29-P1b1  Dre-Mir-29-P1d1  Dre-Mir-29-P1d2  Dre-Mir-29-P2b1 
Orthologues Aca-Mir-29-P2d  Agr-Mir-29-P2  Ami-Mir-29-P2d  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cja-Mir-29-P2d  Cli-Mir-29-P2d  Cmi-Mir-29-P2d  Cpi-Mir-29-P2d  Cpo-Mir-29-P2d  Cte-Mir-29-P2  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dno-Mir-29-P2d  Dpu-Mir-29-P2  Eba-Mir-29-P2  Esc-Mir-29-P2  Ete-Mir-29-P2d  Gga-Mir-29-P2d  Gja-Mir-29-P2d  Gmo-Mir-29-P2d2  Gsp-Mir-29  Hru-Mir-29-P2  Hsa-Mir-29-P2d  Laf-Mir-29-P2d  Lch-Mir-29-P2d  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Loc-Mir-29-P2d-v1  Loc-Mir-29-P2d-v2  Mal-Mir-29-P2d2  Mdo-Mir-29-P2d  Mgi-Mir-29-P2  Mml-Mir-29-P2d  Mmr-Mir-29-P2d  Mmu-Mir-29-P2d  Mom-Mir-29-P2  Mun-Mir-29-P2d  Neu-Mir-29-P2d  Npo-Mir-29-P2  Oan-Mir-29-P2d  Obi-Mir-29-P2  Ocu-Mir-29-P2d  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pab-Mir-29-P2d  Pau-Mir-29-P2  Pbv-Mir-29-P2d  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sha-Mir-29-P2d  Sko-Mir-29-P2  Sme-Mir-29-o2  Spt-Mir-29-P2d  Spu-Mir-29-P2  Sto-Mir-29-P2d  Tgu-Mir-29-P2d  Tni-Mir-29-P2d2  War-Mir-29-P2  Xbo-Mir-29-P2  Xtr-Mir-29-P2d 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr23: 32439975-32440034 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAAGACCUGUGUCCUCUACCCAAGGUUGACCGAUUUCUUUUGGUGUUCAGAGUCUUUUGGGGUUUCUAGCACCAUUUGAAAUCGGUUACAAUGAAGGACCAAUGACGACGAUGGAUUU
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Structure
        10        20                 30        40        50          
UUCAAGACCUGUGUCCUCUACCCAA    ---------|         UUU       C   GUCUUU 
                         GGUU         GACCGAUUUC   UGGUGUU AGA      \
                         CCAG         UUGGCUAAAG   ACCACGA UCU      U
UUUAGGUAGCAGCAGUAA-------    GAAGUAACA^         UUU       -   UUGGGG 
.       110              100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-29-P2d2_5p*
mirBase accessionNone
Sequence 
0- ACCGAUUUCUUUUGGUGUUCAGA -23
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Mature sequence

Dre-Mir-29-P2d2_3p
mirBase accessionNone
Sequence 
38- UAGCACCAUUUGAAAUCGGUUA -60
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