MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-223

Family name MIR-223 (all species)
Seed CAGUUUG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-223  Ami-Mir-223  Bta-Mir-223  Cfa-Mir-223  Cja-Mir-223  Cli-Mir-223  Cmi-Mir-223  Cpi-Mir-223  Cpo-Mir-223  Dno-Mir-223  Dre-Mir-223  Eca-Mir-223  Ete-Mir-223  Gga-Mir-223  Gja-Mir-223  Gmo-Mir-223  Hsa-Mir-223-v1  Hsa-Mir-223-v2  Laf-Mir-223  Lch-Mir-223  Loc-Mir-223  Mal-Mir-223  Mdo-Mir-223  Mml-Mir-223  Mmr-Mir-223  Mmu-Mir-223  Mun-Mir-223  Neu-Mir-223  Oan-Mir-223  Ocu-Mir-223  Pab-Mir-223  Pbv-Mir-223  Pma-Mir-223  Rno-Mir-223  Sha-Mir-223  Spt-Mir-223  Sto-Mir-223  Tgu-Mir-223  Tni-Mir-223  Xla-Mir-223  Xtr-Mir-223 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02009956.1: 2741999-2742057 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGUAGACCCCUCAUUGCCAUUGGCGGCCGUGUGUAUGUGGCGAACUGUGGUGAAGAGAUGACCCUUCAGUUUGUCAUAUACACCGGGCAGCCUGUGGCGCUCACACGGGGUCACCAU
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Structure
        10          20        30        40        50         
CCGGUAGACCCCUCAUU--     U   G   GU                 U-| UGAAG 
                   GCCAU GGC GCC  GUGUAUGUGGCGAACUG  GG     A
                   CGGUG CCG CGG  CACAUAUACUGUUUGAC  CC     G
UACCACUGGGGCACACUCG     U   A   GC                 UU^ CAGUA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-223_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGUGUAUGUGGCGAACUGUGG -22
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Mature sequence

Ebu-Mir-223_3p
mirBase accessionNone
Sequence 
37- UCAGUUUGUCAUAUACACCGGG -59
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