MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-223-v1

Family name MIR-223 (all species)
Seed GUCAGUU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-223
Paralogues Hsa-Mir-223-v2 
Orthologues Aca-Mir-223  Ami-Mir-223  Bta-Mir-223  Cfa-Mir-223  Cja-Mir-223  Cli-Mir-223  Cmi-Mir-223  Cpi-Mir-223  Cpo-Mir-223  Dno-Mir-223  Dre-Mir-223  Ebu-Mir-223  Eca-Mir-223  Ete-Mir-223  Gga-Mir-223  Gja-Mir-223  Gmo-Mir-223  Laf-Mir-223  Lch-Mir-223  Loc-Mir-223  Mal-Mir-223  Mdo-Mir-223  Mml-Mir-223  Mmr-Mir-223  Mmu-Mir-223  Mun-Mir-223  Neu-Mir-223  Oan-Mir-223  Ocu-Mir-223  Pab-Mir-223  Pbv-Mir-223  Pma-Mir-223  Rno-Mir-223  Sha-Mir-223  Spt-Mir-223  Sto-Mir-223  Tgu-Mir-223  Tni-Mir-223  Xla-Mir-223  Xtr-Mir-223 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chrX: 66018895-66018959 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-223-v1)		 Mir-223-v1 chrX: 66018895-66018959 [+] UCSC Ensembl
Mir-223-v2 chrX: 66018895-66018959 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGGCCUGGCCUCCUGCAGUGCCACGCUCCGUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUAGAGUGUCAGUUUGUCAAAUACCCCAAGUGCGGCACAUGCUUACCAGCUCUAGGCCA
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Structure
        10          20        30        40        50        60  
CUUGGCCUGGCCUCCUGCA--|    A    CCGU                GUUGGACACUCC 
                     GUGCC CGCU    GUAUUUGACAAGCUGA            \
                     CACGG GUGA    CAUAAACUGUUUGACU            A
ACCGGAUCUCGACCAUUCGUA^    C    ACCC                GUGAGAUGGUGU 
   120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThe Dicer cuts on the 5p arm are highly variable.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-223-v1_5p*
mirBase accessionMIMAT0004570
Sequence 
0- CGUGUAUUUGACAAGCUGAGUUG -23
Get sequence
Proposed targets microrna.org: MIMAT0004570
TargetScanVert: hsa-miR-223-5p
TargetMiner: hsa-miR-223-5p
miRDB: MIMAT0004570
Mature sequence

Hsa-Mir-223-v1_3p
mirBase accessionMIMAT0000280
Sequence 
42- UGUCAGUUUGUCAAAUACCCCAA -65
Get sequence
Proposed targets microrna.org: MIMAT0000280
TargetScanVert: hsa-miR-223-3p
TargetMiner: hsa-miR-223-3p
miRDB: MIMAT0000280