MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-223

Family name MIR-223 (all species)
Seed GUCAGUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-223
Paralogues
Orthologues Aca-Mir-223  Ami-Mir-223  Bta-Mir-223  Cfa-Mir-223  Cja-Mir-223  Cli-Mir-223  Cmi-Mir-223  Cpi-Mir-223  Cpo-Mir-223  Dno-Mir-223  Dre-Mir-223  Ebu-Mir-223  Eca-Mir-223  Ete-Mir-223  Gga-Mir-223  Gja-Mir-223  Gmo-Mir-223  Hsa-Mir-223-v1  Hsa-Mir-223-v2  Laf-Mir-223  Lch-Mir-223  Loc-Mir-223  Mal-Mir-223  Mdo-Mir-223  Mml-Mir-223  Mmr-Mir-223  Mun-Mir-223  Neu-Mir-223  Oan-Mir-223  Ocu-Mir-223  Pab-Mir-223  Pbv-Mir-223  Pma-Mir-223  Rno-Mir-223  Sha-Mir-223  Spt-Mir-223  Sto-Mir-223  Tgu-Mir-223  Tni-Mir-223  Xla-Mir-223  Xtr-Mir-223 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chrX: 96242842-96242906 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAUCUGGCCAUCUGCAGUGUCACGCUCCGUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUAGAGUGUCAGUUUGUCAAAUACCCCAAGUGUGGCUCAUGCCUAUCAGCUCCAGGUCC
Get precursor sequence
Structure
        10         20         30        40        50        60  
CCUGAUCUGGCCAUCUG-  GU-|       CCGU                GUUGGACACUCU 
                  CA   GUCACGCU    GUAUUUGACAAGCUGA            \
                  GU   CGGUGUGA    CAUAAACUGUUUGACU            G
CCUGGACCUCGACUAUCC  ACU^       ACCC                GUGAGAUGGUGU 
   120       110       100        90        80        70
Deep sequencing
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CommentThe Dicer cuts on the 5p arm are highly variable.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-223_5p*
mirBase accessionMIMAT0017056
Sequence 
0- CGUGUAUUUGACAAGCUGAGUUG -23
Get sequence
Proposed targets TargetScanVert: mmu-miR-223-5p
miRDB: MIMAT0017056
Mature sequence

Mmu-Mir-223_3p
mirBase accessionMIMAT0000665
Sequence 
42- UGUCAGUUUGUCAAAUACCCCAA -65
Get sequence
Proposed targets microrna.org: MIMAT0000665
TargetScanVert: mmu-miR-223-3p
miRDB: MIMAT0000665