MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-223

Family name MIR-223 (all species)
Seed GUCAGUU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-223  Ami-Mir-223  Bta-Mir-223  Cfa-Mir-223  Cja-Mir-223  Cli-Mir-223  Cmi-Mir-223  Cpi-Mir-223  Cpo-Mir-223  Dno-Mir-223  Dre-Mir-223  Ebu-Mir-223  Eca-Mir-223  Ete-Mir-223  Gga-Mir-223  Gja-Mir-223  Gmo-Mir-223  Hsa-Mir-223-v1  Hsa-Mir-223-v2  Laf-Mir-223  Lch-Mir-223  Loc-Mir-223  Mal-Mir-223  Mdo-Mir-223  Mml-Mir-223  Mmr-Mir-223  Mmu-Mir-223  Neu-Mir-223  Oan-Mir-223  Ocu-Mir-223  Pab-Mir-223  Pbv-Mir-223  Pma-Mir-223  Rno-Mir-223  Sha-Mir-223  Spt-Mir-223  Sto-Mir-223  Tgu-Mir-223  Tni-Mir-223  Xla-Mir-223  Xtr-Mir-223 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 223_LR594638.1:10404916-10405051: 36-101 [-]
Precursor
(pre-Mir +30nt flank)
ACGUGGACAUCUGGGCACGGCGUUGCGCUCCGUAUAUUUGAUAAGCUGAAUUUGACACUCAUUUGUGGUAGAGUGUCAGUUUAUCAAAUAUUCUAAGCGAGGCGUCUGAUCAGCAGCCACACUACC
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Structure
        10          20        30        40         50        60  
ACGUGGACAUCUGGGCAC--     UG    CCGU                -|   GACACUCA 
                    GGCGU  CGCU    AUAUUUGAUAAGCUGA AUUU        \
                    CUGCG  GCGA    UAUAAACUAUUUGACU UGAG        U
CCAUCACACCGACGACUAGU     GA    AUCU                G^   AUGGUGUU 
    120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Mun-Mir-223_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGUAUAUUUGAUAAGCUGAAUUU -23
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Mature sequence

Mun-Mir-223_3p (predicted)
mirBase accessionNone
Sequence 
43- UGUCAGUUUAUCAAAUAUUCUAA -66
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