MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-217-v2

Family name MIR-217 (all species)
Seed UACUGCA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-217-v1 
Orthologues Aca-Mir-217-v2  Ami-Mir-217-v2  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v2  Cfa-Mir-217-v2  Cja-Mir-217-v2  Cli-Mir-217-v2  Cmi-Mir-217  Cpi-Mir-217-v2  Cpo-Mir-217-v2  Dno-Mir-217-v2  Dre-Mir-217-v2  Eca-Mir-217-v2  Gga-Mir-217-v2  Gja-Mir-217-v2  Gmo-Mir-217  Hsa-Mir-217-v2  Laf-Mir-217  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v2  Mmr-Mir-217  Mmu-Mir-217-v2  Mun-Mir-217-v2  Neu-Mir-217-v2  Oan-Mir-217-v2  Ocu-Mir-217-v2  Pab-Mir-217-v2  Pbv-Mir-217-v2  Rno-Mir-217-v2  Sha-Mir-217-v2  Spt-Mir-217  Sto-Mir-217-v2  Tgu-Mir-217-v2  Tni-Mir-217  Xtr-Mir-217-v2 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(echTel2)		 JH980337: 15887002-15887062 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UAACGUCACAAAGAGCUUUUGAUGUUGCAGGUACUGCAUCAGGAACUGAUCGGAUAAGUAUCUGUCACCAUCAGUUCCUAAUGCACUGCCUUCAGCAUCUAACUGAGCUUCAGGAAACACC
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Structure
        10        20          30        40        50        60
UAACGUCACAAAGAGCUUUU--|      C     C     C          C  AUAAGU 
                      GAUGUUG AGGUA UGCAU AGGAACUGAU GG      A
                      CUACGAC UCCGU ACGUA UCCUUGACUA CC      U
CCACAAAGGACUUCGAGUCAAU^      U     C     A          -  ACUGUC 
 .       110       100        90        80        70
Deep sequencing
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CommentThere is a one nt mismatch between the reads and the genomic sequence the 3' end of the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-217-v2_5p
mirBase accessionNone
Sequence 
0- GUACUGCAUCAGGAACUGAUCGG -23
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Star sequence

Ete-Mir-217-v2_3p*
mirBase accessionNone
Sequence 
39- AUCAGUUCCUAAUGCACUGCCU -61
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