MirGeneDB 2.1
60 microRNA genes with node of origin C. familiaris
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Cfa-Mir-29-P2d7 cfa-mir-29c-1 MIR-29 AGCACCA None MIMAT0006705 chr7 6651339 6651396 - C. familiaris Bilateria No 1
Cfa-Mir-29-P2d8 None MIR-29 AGCACCA None None chr7 6588010 6588067 - C. familiaris Bilateria No 1
Cfa-Mir-147-P1-v1 cfa-mir-147 MIR-147 UGUGCGG None MIMAT0009874 chr30 11800635 11800694 + C. familiaris Vertebrata No 1
Cfa-Mir-147-P1-v2 cfa-mir-147 MIR-147 GUGUGCG None MIMAT0009874 chr30 11800636 11800693 + C. familiaris Vertebrata No 1
Cfa-Mir-147-P2-v1 None MIR-147 UGUGCGG None None chr15 58855318 58855377 + C. familiaris Vertebrata No 1
Cfa-Mir-147-P2-v2 None MIR-147 GUGUGCG None None chr15 58855319 58855376 + C. familiaris Vertebrata No 1
Cfa-Mir-430-P5d1 cfa-mir-371 MIR-430 CUCAAAA MIMAT0007747 None chr1 103606523 103606582 + C. familiaris Vertebrata No
Cfa-Mir-430-P5d2 None MIR-430 CUCAAAA None None chr1 103406620 103406679 + C. familiaris Vertebrata No
Cfa-Mir-430-P7d1 None MIR-430 AAGUGCU None None chr1 103606026 103606080 - C. familiaris Vertebrata Unknown 1
Cfa-Mir-430-P7d2 None MIR-430 AAGUGCU None None chr1 103406123 103406177 - C. familiaris Vertebrata Unknown 1
Cfa-Mir-506-P2d cfa-mir-507a MIR-506 GAUUGGC None MIMAT0034432 chrX 115652721 115652779 - C. familiaris Eutheria No 1 1
Cfa-Mir-506-P2e cfa-mir-507b MIR-506 UUGGCAC None MIMAT0034416 chrX 115665393 115665450 - C. familiaris Eutheria No 1
Cfa-Mir-506-P3a cfa-mir-508a MIR-506 CUGUCAC MIMAT0034419 None chrX 115658398 115658456 - C. familiaris Eutheria No 1
Cfa-Mir-506-P3b cfa-mir-508b MIR-506 CUGUCAC None MIMAT0034425 chrX 115658609 115658666 - C. familiaris Eutheria No 1
Cfa-Mir-544-P1 cfa-mir-544 MIR-544 CUUGUUA None MIMAT0009910 chr8 69277674 69277731 + C. familiaris Eutheria No 1
Cfa-Mir-544-P2 None MIR-544 CUUGUUA None None chr12 49638412 49638468 - C. familiaris Eutheria No 1 1
Cfa-Mir-1835 cfa-mir-1835 MIR-1835 GCACCCU MIMAT0006596 None chr10 27296054 27296114 + C. familiaris C. familiaris No 1 1
Cfa-Mir-1838 cfa-mir-1838 MIR-1838 CACCAGC MIMAT0006644 None chr21 20592019 20592076 + C. familiaris C. familiaris No 1 1
Cfa-Mir-1840 cfa-mir-1840 MIR-1840 GUUAGGG None MIMAT0006679 chr37 25734791 25734851 + C. familiaris C. familiaris No 1
Cfa-Mir-1844 cfa-mir-1844 MIR-1844 GGACUAC MIMAT0006740 None chr9 32760904 32760963 + C. familiaris C. familiaris No
Cfa-Mir-8859-P1 cfa-mir-8859b MIR-8859 CCGCGCC None MIMAT0034358 chr18 46690581 46690638 - C. familiaris C. familiaris No 1
Cfa-Mir-8859-P2 cfa-mir-8859a MIR-8859 GGAUCGG None MIMAT0034354 chr18 46690410 46690471 - C. familiaris C. familiaris No 1
Cfa-Mir-8902 cfa-mir-8902 MIR-8902 AUCCAUU MIMAT0034412 None chr4 50474028 50474084 + C. familiaris C. familiaris Yes 1 1
Cfa-Mir-8908-P1a1 cfa-mir-8908a-1 MIR-8908 AUUAGGA MIMAT0034428 MIMAT0034429 chrX 114689813 114689872 - C. familiaris C. familiaris No
Cfa-Mir-8908-P1a2 cfa-mir-8908a-3 MIR-8908 AUUAGGA MIMAT0034428 MIMAT0034429 chrX 114684100 114684159 - C. familiaris C. familiaris No 1
Cfa-Mir-8908-P1b cfa-mir-8908a-2 MIR-8908 AUUAGGA None MIMAT0034429 chrX 114687030 114687089 - C. familiaris C. familiaris No
Cfa-Mir-8908-P1c cfa-mir-8908a-4 MIR-8908 AUUAGGA MIMAT0034428 MIMAT0034429 chrX 114680911 114680970 - C. familiaris C. familiaris No 1
Cfa-Mir-8908-P1d None MIR-8908 UUAGGAC None None chrUn_JH373668 22740 22799 + C. familiaris C. familiaris Unknown 1
Cfa-Mir-8908-P2 cfa-mir-8908b MIR-8908 AUUCAGG None MIMAT0034415 chrX 114678505 114678561 - C. familiaris C. familiaris No 1 1
Cfa-Mir-8908-P3 cfa-mir-8908c MIR-8908 AUUAGCA None MIMAT0034433 chrX 114675836 114675892 - C. familiaris C. familiaris No 1 1
Cfa-Mir-8908-P4a1 cfa-mir-8908d-1 MIR-8908 UUAGCGC None MIMAT0034420 chrX 114688877 114688935 - C. familiaris C. familiaris No
Cfa-Mir-8908-P4a2 cfa-mir-8908d-2 MIR-8908 UUAGCGC None MIMAT0034420 chrX 114679976 114680034 - C. familiaris C. familiaris No
Cfa-Mir-8908-P4b cfa-mir-8908d-3 MIR-8908 UAGCGCC None MIMAT0034420 chrX 114686169 114686227 - C. familiaris C. familiaris No
Cfa-Mir-8908-P4c None MIR-8908 UAGCGCC None None chrUn_JH373668 23687 23747 + C. familiaris C. familiaris No 1
Cfa-Mir-8908-P5 cfa-mir-8908e MIR-8908 GCAUAGG MIMAT0034426 None chrX 114676848 114676903 - C. familiaris C. familiaris No 1 1
Cfa-Mir-8908-P6 cfa-mir-8908f MIR-8908 AGUGACU MIMAT0034418 None chrX 114717103 114717160 - C. familiaris C. familiaris No 1 1
Cfa-Mir-8908-P7 None MIR-8908 UUAGCAU None None chrUn_JH373668 10366 10422 + C. familiaris C. familiaris No 1 1
Cfa-Mir-8908-P8 None MIR-8908 AUCCAGA None None chrUn_JH373668 13007 13063 + C. familiaris C. familiaris No 1
Cfa-Novel-1 None CFA-NOVEL-1 GAGCAUU None None chr1 71774336 71774393 - C. familiaris C. familiaris Yes
Cfa-Novel-2 None CFA-NOVEL-2 CCAGGGC None None chr10 16859592 16859655 - C. familiaris C. familiaris No
Cfa-Novel-3 None CFA-NOVEL-3 CUCCAUU None None chr11 63290160 63290220 + C. familiaris C. familiaris No
Cfa-Novel-4 None CFA-NOVEL-4 GGGAUCU None None chr15 23529219 23529285 - C. familiaris C. familiaris No
Cfa-Novel-5 None CFA-NOVEL-5 AGUGAGG None None chr16 19323168 19323224 - C. familiaris C. familiaris Yes
Cfa-Novel-6 None CFA-NOVEL-6 CAUUCCC None None chr16 20758531 20758592 - C. familiaris C. familiaris No
Cfa-Novel-7 None CFA-NOVEL-7 UGGGGAC None None chr20 1756519 1756572 + C. familiaris C. familiaris Yes 1
Cfa-Novel-8 None CFA-NOVEL-8 GGGCAGG None None chr20 50060114 50060170 + C. familiaris C. familiaris Yes
Cfa-Novel-9 None CFA-NOVEL-9 GCGGGGG None None chr20 57016350 57016409 - C. familiaris C. familiaris Yes
Cfa-Novel-10 None CFA-NOVEL-10 UCAGUCU None None chr24 22892649 22892709 - C. familiaris C. familiaris No 1
Cfa-Novel-11 None CFA-NOVEL-11 CUCCUGG None None chr28 21274743 21274813 - C. familiaris C. familiaris Yes 1
Cfa-Novel-12 None CFA-NOVEL-12 CUGAGAG None None chr3 15387060 15387122 + C. familiaris C. familiaris No 1
Cfa-Novel-13 None CFA-NOVEL-13 UCAGAGC None None chr3 35437742 35437806 + C. familiaris C. familiaris No 1
Cfa-Novel-14 None CFA-NOVEL-14 AUCUUGA None None chr3 89188779 89188838 - C. familiaris C. familiaris No 1
Cfa-Novel-15 None CFA-NOVEL-15 UCAUCAU None None chr30 27388078 27388136 + C. familiaris C. familiaris No 1
Cfa-Novel-16 None CFA-NOVEL-16 AACCAGG None None chr5 15196614 15196677 + C. familiaris C. familiaris No 1
Cfa-Novel-17 None CFA-NOVEL-17 GGCAGCA None None chr6 12879003 12879059 - C. familiaris C. familiaris Yes
Cfa-Novel-18 None CFA-NOVEL-18 ACUGGAG None None chr7 449942 450014 + C. familiaris C. familiaris No 1
Cfa-Novel-21 None CFA-NOVEL-21 UUCUCAU None None chrX 13777803 13777884 + C. familiaris C. familiaris No
Cfa-Novel-22 None CFA-NOVEL-22 ACAGAGA None None chrX 55489338 55489394 + C. familiaris C. familiaris No 1
Cfa-Novel-23 None CFA-NOVEL-23 CCAGCAG None None chrX 32945420 32945483 - C. familiaris C. familiaris No 1
Cfa-Novel-24 None CFA-NOVEL-24 ACGUUGG None None chrX 37879009 37879064 - C. familiaris C. familiaris No

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