MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-217-v2

Family name MIR-217 (all species)
Seed UACUGCA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-217
Paralogues Rno-Mir-217-v1 
Orthologues Aca-Mir-217-v2  Ami-Mir-217-v2  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v2  Cfa-Mir-217-v2  Cja-Mir-217-v2  Cli-Mir-217-v2  Cmi-Mir-217  Cpi-Mir-217-v2  Cpo-Mir-217-v2  Dno-Mir-217-v2  Dre-Mir-217-v2  Eca-Mir-217-v2  Ete-Mir-217-v2  Gga-Mir-217-v2  Gja-Mir-217-v2  Gmo-Mir-217  Hsa-Mir-217-v2  Laf-Mir-217  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v2  Mmr-Mir-217  Mmu-Mir-217-v2  Mun-Mir-217-v2  Neu-Mir-217-v2  Oan-Mir-217-v2  Ocu-Mir-217-v2  Pab-Mir-217-v2  Pbv-Mir-217-v2  Sha-Mir-217-v2  Spt-Mir-217  Sto-Mir-217-v2  Tgu-Mir-217-v2  Tni-Mir-217  Xtr-Mir-217-v2 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(rn6)		 chr14: 113119559-113119619 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-v2)		 Mir-216-P2a chr14: 113101097-113101158 [+] UCSC Ensembl
Mir-216-P2b chr14: 113112147-113112208 [+] UCSC Ensembl
Mir-217-v2 chr14: 113119559-113119619 [+] UCSC Ensembl
Mir-217-v1 chr14: 113119560-113119618 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCACAGUCAUUGUAGUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAGCCACCAGCAAACAUC
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Structure
        10        20          30        40        50        60
ACCACAGUCAUUGUAGUUUU--|    CGC  A  C     C         C   AUAAGA 
                      GAUGU   AG UA UGCAU AGGAACUGA UGG      C
                      CUACG   UC GU ACGUA UCCUUGACU ACC      U
CUACAAACGACCACCGACAAAU^    ACU  C  U     A         -   ACUGAC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Mature sequence

Rno-Mir-217-v2_5p
mirBase accessionMIMAT0000887
Sequence 
0- AUACUGCAUCAGGAACUGACUGG -23
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Proposed targets microrna.org: MIMAT0000887
TargetScanVert: rno-miR-217-5p
miRDB: MIMAT0000887
Star sequence

Rno-Mir-217-v2_3p*
mirBase accessionMIMAT0017161
Sequence 
39- AUCAGUUCCUAAUGCAUUGCCU -61
Get sequence
Proposed targets TargetScanVert: rno-miR-217-3p
miRDB: MIMAT0017161