MirGeneDB ID | Mml-Mir-199-P3-v1 |
Family name |
MIR-199 (all species) |
Seed |
CAGUAGU |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-199a-2
|
Paralogues |
Mml-Mir-199-P1-v1
Mml-Mir-199-P1-v2
Mml-Mir-199-P1-v3
Mml-Mir-199-P2-v1
Mml-Mir-199-P2-v2
Mml-Mir-199-P2-v3
Mml-Mir-199-P3-v2
Mml-Mir-199-P3-v3
|
Orthologues |
Aca-Mir-199-P3-v1
Aca-Mir-199-P3-v2
Aca-Mir-199-P3-v3
Ami-Mir-199-P3-v1
Ami-Mir-199-P3-v2
Ami-Mir-199-P3-v3
Bta-Mir-199-P3-v1
Bta-Mir-199-P3-v2
Bta-Mir-199-P3-v3
Cfa-Mir-199-P3-v1
Cfa-Mir-199-P3-v2
Cfa-Mir-199-P3-v3
Cja-Mir-199-P3-v1
Cja-Mir-199-P3-v2
Cja-Mir-199-P3-v3
Cpi-Mir-199-P3-v1
Cpi-Mir-199-P3-v2
Cpi-Mir-199-P3-v3
Cpo-Mir-199-P3-v1
Cpo-Mir-199-P3-v2
Cpo-Mir-199-P3-v3
Dre-Mir-199-P3-v1
Dre-Mir-199-P3-v2
Dre-Mir-199-P3-v3
Eca-Mir-199-P3-v1
Eca-Mir-199-P3-v2
Eca-Mir-199-P3-v3
Ete-Mir-199-P3-v1
Ete-Mir-199-P3-v2
Ete-Mir-199-P3-v3
Gja-Mir-199-P3-v1
Gja-Mir-199-P3-v2
Gja-Mir-199-P3-v3
Gmo-Mir-199-P3-v1
Gmo-Mir-199-P3-v2
Gmo-Mir-199-P3-v3
Hsa-Mir-199-P3-v1
Hsa-Mir-199-P3-v2
Hsa-Mir-199-P3-v3
Laf-Mir-199-P3-v1
Laf-Mir-199-P3-v2
Laf-Mir-199-P3-v3
Lch-Mir-199-P3
Loc-Mir-199-P3-v1
Loc-Mir-199-P3-v2
Mal-Mir-199-P3-v1
Mal-Mir-199-P3-v2
Mal-Mir-199-P3-v3
Mdo-Mir-199-P3-v1
Mdo-Mir-199-P3-v2
Mdo-Mir-199-P3-v3
Mmr-Mir-199-P3-v1
Mmr-Mir-199-P3-v2
Mmr-Mir-199-P3-v3
Mmu-Mir-199-P3-v1
Mmu-Mir-199-P3-v2
Mmu-Mir-199-P3-v3
Mun-Mir-199-P3-v1
Mun-Mir-199-P3-v2
Mun-Mir-199-P3-v3
Neu-Mir-199-P3-v1
Neu-Mir-199-P3-v2
Neu-Mir-199-P3-v3
Ocu-Mir-199-P3-v1
Ocu-Mir-199-P3-v2
Ocu-Mir-199-P3-v3
Pab-Mir-199-P3-v1
Pab-Mir-199-P3-v2
Pab-Mir-199-P3-v3
Pbv-Mir-199-P3-v1
Pbv-Mir-199-P3-v2
Pbv-Mir-199-P3-v3
Pma-Mir-199-o3
Sha-Mir-199-P3-v1
Sha-Mir-199-P3-v2
Sha-Mir-199-P3-v3
Tni-Mir-199-P3-v1
Tni-Mir-199-P3-v2
Tni-Mir-199-P3-v3
Xla-Mir-199-P3a
Xla-Mir-199-P3b
Xtr-Mir-199-P3
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014354.1: 10581835-10581897 [-]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-199-P3-v1) |
Mir-199-P3-v1
CM014354.1: 10581835-10581897 [-]
UCSC
Ensembl
Mir-199-P3-v2
CM014354.1: 10581835-10581897 [-]
UCSC
Ensembl
Mir-199-P3-v3
CM014354.1: 10581835-10581897 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) | UGCUGCGGGAUGGACAGCCGGCCUCGCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAACGUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUUGGGUGAGCGGCGCGUCGAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCUGCGGGAUGGACAG- -| C AAC U C U AGGAGGC
CC GGCCU GCC CCAGUGU CAGACUAC UGU C U
GG UCGGG CGG GGUUACA GUCUGAUG ACA G C
AGAGCUGCGCGGCGAGUG U^ U AUU C - U UGCAACU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-199-P3-v1_5p* |
mirBase accession | MIMAT0006231 |
Sequence |
0- CCCAGUGUUCAGACUACCUGUUC -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-199a-5p
|
Mature sequence |
Mml-Mir-199-P3-v1_3p |
mirBase accession | MIMAT0006232 |
Sequence |
41- ACAGUAGUCUGCACAUUGGUUA -63
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-199a-3p
|