MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-199-P3-v3

Family name MIR-199 (all species)
Seed AGUAGUC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-199-2
Paralogues Mmr-Mir-199-P1-v1  Mmr-Mir-199-P1-v2  Mmr-Mir-199-P1-v3  Mmr-Mir-199-P2-v1  Mmr-Mir-199-P2-v2  Mmr-Mir-199-P2-v3  Mmr-Mir-199-P3-v1  Mmr-Mir-199-P3-v2 
Orthologues Aca-Mir-199-P3-v1  Aca-Mir-199-P3-v2  Aca-Mir-199-P3-v3  Ami-Mir-199-P3-v1  Ami-Mir-199-P3-v2  Ami-Mir-199-P3-v3  Bta-Mir-199-P3-v1  Bta-Mir-199-P3-v2  Bta-Mir-199-P3-v3  Cfa-Mir-199-P3-v1  Cfa-Mir-199-P3-v2  Cfa-Mir-199-P3-v3  Cja-Mir-199-P3-v1  Cja-Mir-199-P3-v2  Cja-Mir-199-P3-v3  Cpi-Mir-199-P3-v1  Cpi-Mir-199-P3-v2  Cpi-Mir-199-P3-v3  Cpo-Mir-199-P3-v1  Cpo-Mir-199-P3-v2  Cpo-Mir-199-P3-v3  Dre-Mir-199-P3-v1  Dre-Mir-199-P3-v2  Dre-Mir-199-P3-v3  Eca-Mir-199-P3-v1  Eca-Mir-199-P3-v2  Eca-Mir-199-P3-v3  Ete-Mir-199-P3-v1  Ete-Mir-199-P3-v2  Ete-Mir-199-P3-v3  Gja-Mir-199-P3-v1  Gja-Mir-199-P3-v2  Gja-Mir-199-P3-v3  Gmo-Mir-199-P3-v1  Gmo-Mir-199-P3-v2  Gmo-Mir-199-P3-v3  Hsa-Mir-199-P3-v1  Hsa-Mir-199-P3-v2  Hsa-Mir-199-P3-v3  Laf-Mir-199-P3-v1  Laf-Mir-199-P3-v2  Laf-Mir-199-P3-v3  Lch-Mir-199-P3  Loc-Mir-199-P3-v1  Loc-Mir-199-P3-v2  Mal-Mir-199-P3-v1  Mal-Mir-199-P3-v2  Mal-Mir-199-P3-v3  Mdo-Mir-199-P3-v1  Mdo-Mir-199-P3-v2  Mdo-Mir-199-P3-v3  Mml-Mir-199-P3-v1  Mml-Mir-199-P3-v2  Mml-Mir-199-P3-v3  Mmu-Mir-199-P3-v1  Mmu-Mir-199-P3-v2  Mmu-Mir-199-P3-v3  Mun-Mir-199-P3-v1  Mun-Mir-199-P3-v2  Mun-Mir-199-P3-v3  Neu-Mir-199-P3-v1  Neu-Mir-199-P3-v2  Neu-Mir-199-P3-v3  Ocu-Mir-199-P3-v1  Ocu-Mir-199-P3-v2  Ocu-Mir-199-P3-v3  Pab-Mir-199-P3-v1  Pab-Mir-199-P3-v2  Pab-Mir-199-P3-v3  Pbv-Mir-199-P3-v1  Pbv-Mir-199-P3-v2  Pbv-Mir-199-P3-v3  Pma-Mir-199-o3  Sha-Mir-199-P3-v1  Sha-Mir-199-P3-v2  Sha-Mir-199-P3-v3  Tni-Mir-199-P3-v1  Tni-Mir-199-P3-v2  Tni-Mir-199-P3-v3  Xla-Mir-199-P3a  Xla-Mir-199-P3b  Xtr-Mir-199-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007684.1: 5272253-5272315 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-199-P3-v3)		 Mir-199-P3-v1 CM007684.1: 5272253-5272315 [+] UCSC Ensembl
Mir-199-P3-v2 CM007684.1: 5272253-5272315 [+] UCSC Ensembl
Mir-199-P3-v3 CM007684.1: 5272253-5272315 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCGGGGACAGACAGCCGGCCCCGCCGGCCCAGUGUUCAGACUACCUGUUCAGGGGCUGCUGCACGCGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUCGGCGAGCGGCGACAGGGCGG
Get precursor sequence
Structure
        10         20         30        40        50        60 
GGGCCGGGGACAGACAG-   -|   C   GGC       U        C   UCAGGGGCU 
                  CCG GCCC GCC   CCAGUGU CAGACUAC UGU         G
                  GGC CGGG CGG   GGUUACA GUCUGAUG ACA         C
GGCGGGACAGCGGCGAGC   U^   U   AUU       C        -   UGCGCACGU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-199-P3-v3_5p*
mirBase accessionNone
Sequence 
0- CCCAGUGUUCAGACUACCUGUU -22
Get sequence
Mature sequence

Mmr-Mir-199-P3-v3_3p
mirBase accessionMIMAT0049179
Sequence 
42- CAGUAGUCUGCACAUUGGUUA -63
Get sequence