MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-96-P1i

Family name MIR-96 (all species)
Seed UUUGGCA
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-96-P2 
Orthologues Agr-Mir-96-P1i  Ami-Mir-96-P1  Ava-Mir-96-o1  Bfl-Mir-96-P1  Bla-Mir-96-P1  Bta-Mir-96-P1  Cfa-Mir-96-P1  Cin-Mir-96-P1  Cja-Mir-96-P1  Cli-Mir-96-P1  Cmi-Mir-96-P1  Cpi-Mir-96-P1  Cpo-Mir-96-P1  Cte-Mir-96-P1  Dno-Mir-96-P1  Eba-Mir-96-P1  Eca-Mir-96-P1  Efe-Mir-96-P1  Egr-Mir-96-P1  Esc-Mir-96-P1i  Ete-Mir-96-P1  Gga-Mir-96-P1  Gja-Mir-96-P1  Hru-Mir-96-P1i  Hsa-Mir-96-P1  Isc-Mir-96-P1  Laf-Mir-96-P1  Lan-Mir-96-P1  Lch-Mir-96-P1  Lgi-Mir-96-P1i  Lhy-Mir-96-P1  Llo-Mir-96-P1  Loc-Mir-96-P1  Mdo-Mir-96-P1  Mgi-Mir-96-P1i  Mml-Mir-96-P1  Mmr-Mir-96-P1  Mmu-Mir-96-P1  Mom-Mir-96-P1i  Mun-Mir-96-P1  Neu-Mir-96-P1  Npo-Mir-96-P1i  Oan-Mir-96-P1  Ocu-Mir-96-P1  Pab-Mir-96-P1  Pau-Mir-96-P1  Pbv-Mir-96-P1  Pca-Mir-96-P1  Pcr-Mir-96-P1  Pfl-Mir-96-P1  Pmi-Mir-96-P1  Pve-Mir-96-P1i  Rno-Mir-96-P1  Rph-Mir-96-P1i  Sha-Mir-96-P1  Sko-Mir-96-P1  Sma-Mir-96-P1  Snu-Mir-96-P1  Spt-Mir-96-P1  Spu-Mir-96-P1  Sro-Mir-96-P1  Sto-Mir-96-P1  Tgu-Mir-96-P1  War-Mir-96-P1  Xbo-Mir-96-P1  Xtr-Mir-96-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Bilateria
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 ref|NC_043026.1|:13869695-13869829: 35-92 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAGAAAAAGACACCGAUGCUUGCUGCUUAUUUGGCAUCUGUGGAAUAAUCCUUCCUUACCAGAGAUUAUACACCGGUGCCAAGUAAAGAGCGAUGCUCAAUACCACCAACUUUAGC
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Structure
        10         20         30        40        50         
GAGAGAAAAAGACACCGAU-  -|    GC            U   GA      - UUCC 
                    GC UUGCU  UUAUUUGGCAUC GUG  AUAAUC C    U
                    CG AGCGA  AAUGAACCGUGG CAC  UAUUAG G    U
CGAUUUCAACCACCAUAACU  U^    GA            C   A-      A ACCA 
      110       100        90        80         70        60
Deep sequencing
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CommentThere is a second set of 5p reads corresponding to another unsequenced genomic locus, most likely Mir-96-P1f.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Mature sequence

Ovu-Mir-96-P1i_5p (predicted)
mirBase accessionNone
Sequence 
0- AUUUGGCAUCUGUGGAAUAAUCC -23
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Star sequence

Ovu-Mir-96-P1i_3p* (predicted)
mirBase accessionNone
Sequence 
36- AUUAUACACCGGUGCCAAGUAA -58
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