MirGeneDB 2.1
MirGeneDB ID

Xbo-Mir-96-P1

Family name MIR-96 (all species)
Seed UUGGCAC
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues
Orthologues Ami-Mir-96-P1  Bfl-Mir-96-P1  Bla-Mir-96-P1  Bta-Mir-96-P1  Cfa-Mir-96-P1  Cgi-Mir-96-P1h  Cgi-Mir-96-P1i  Cin-Mir-96-P1  Cli-Mir-96-P1  Cmi-Mir-96-P1  Cpi-Mir-96-P1  Cpo-Mir-96-P1  Csc-Mir-96-P1w  Csc-Mir-96-P1x  Cte-Mir-96-P1  Dno-Mir-96-P1  Dre-Mir-96-P1a  Ebu-Mir-96-P1e  Ebu-Mir-96-P1f  Ebu-Mir-96-P1g  Efe-Mir-96-P1  Esc-Mir-96-P1h  Ete-Mir-96-P1  Gga-Mir-96-P1  Gja-Mir-96-P1  Gmo-Mir-96-P1a  Hsa-Mir-96-P1  Isc-Mir-96-P1  Lan-Mir-96-P1  Lch-Mir-96-P1  Lgi-Mir-96-P1h  Lgi-Mir-96-P1i  Loc-Mir-96-P1  Lpo-Mir-96-P1r-v1  Lpo-Mir-96-P1r-v2  Lpo-Mir-96-P1s  Lpo-Mir-96-P1t  Lpo-Mir-96-P1u  Mal-Mir-96-P1a  Mal-Mir-96-P1b  Mdo-Mir-96-P1  Mml-Mir-96-P1  Mmu-Mir-96-P1  Mun-Mir-96-P1  Npo-Mir-96-P1h  Npo-Mir-96-P1i  Oan-Mir-96-P1  Ocu-Mir-96-P1  Ovu-Mir-96-P1h  Pbv-Mir-96-P1  Pfl-Mir-96-P1  Pma-Mir-96-P1o1  Pma-Mir-96-P1o2  Pmi-Mir-96-P1  Rno-Mir-96-P1  Sha-Mir-96-P1  Sko-Mir-96-P1  Sme-Mir-96-P1j  Sme-Mir-96-P1k  Spt-Mir-96-P1  Spu-Mir-96-P1  Sto-Mir-96-P1  Tgu-Mir-96-P1  Tni-Mir-96-P1a  Tni-Mir-96-P1b  Xla-Mir-96-P1c  Xla-Mir-96-P1d  Xtr-Mir-96-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Xbocki_plus)		 scaffold1822: 63524-63583 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUCACCGGAUAUUUGGUGCUGGUACGUUAUUUGGCACUAGCACAUAAUUGCUGUAUGUUCUGCGUCGCAAUUUAUGCUAGUGGCAAGUACAGUAUUGGUGUAUGUUUCGUCGUUGGAUG
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Structure
        10          20        30        40        50          
CGUCACCGGAUAUUUGGU--| UG    GU      G        CAU      UGUAUGU 
                    GC  GUAC  UAUUUG CACUAGCA   AAUUGC       \
                    UG  UAUG  AUGAAC GUGAUCGU   UUAACG       U
GUAGGUUGCUGCUUUGUAUG^ GU    AC      G        AU-      CUGCGUC 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
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Mature sequence

Xbo-Mir-96-P1_5p
mirBase accessionNone
Sequence 
0- UUUGGCACUAGCACAUAAUUGCU -23
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Star sequence

Xbo-Mir-96-P1_3p*
mirBase accessionNone
Sequence 
38- CAAUUUAUGCUAGUGGCAAGUA -60
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