| MirGeneDB ID | Pab-Mir-218-P2 |
|---|---|
| Family name | MIR-218 (all species) |
| Seed | UGUGCUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-218-P4 |
| Orthologues | Aca-Mir-218-P2 Ami-Mir-218-P2 Bta-Mir-218-P2 Cfa-Mir-218-P2 Cja-Mir-218-P2 Cli-Mir-218-P2 Cmi-Mir-218-P2 Cpi-Mir-218-P2 Cpo-Mir-218-P2 Dno-Mir-218-P2 Dre-Mir-218-P2 Eca-Mir-218-P2 Ete-Mir-218-P2 Gga-Mir-218-P2 Gja-Mir-218-P2 Gmo-Mir-218-P2 Hsa-Mir-218-P2 Laf-Mir-218-P2 Lch-Mir-218-P2 Loc-Mir-218-P2 Mal-Mir-218-P2 Mdo-Mir-218-P2 Mml-Mir-218-P2 Mmr-Mir-218-P2 Mmu-Mir-218-P2 Mun-Mir-218-P2 Neu-Mir-218-P2 Oan-Mir-218-P2 Ocu-Mir-218-P2 Pbv-Mir-218-P2 Pma-Mir-218-o2 Rno-Mir-218-P2 Sha-Mir-218-P2 Spt-Mir-218-P2 Sto-Mir-218-P2 Tgu-Mir-218-P2 Tni-Mir-218-P2 Xla-Mir-218-P2a Xla-Mir-218-P2b Xtr-Mir-218-P2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 19634907-19634970 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGUGUAGUGAUAAUGUAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGGUUGCGAGGUAUGAGUAAAACAUGGUUCCGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACAGCAUGACAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GGUGUAGUGAUAAUGUA--| A U U CU GGUUGCGAG GCG GAU UUCUGU GUGCUUGAU AACCAUGU G CGC CUG AAGGUA CACGAACUG UUGGUACA U ACAGUACGACAUCUUUCGA^ A C C CC AAAUGAGUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-218-P2_5p |
| mirBase accession | None |
| Sequence |
0- UUGUGCUUGAUCUAACCAUGU -21
Get sequence
|
| Star sequence | Pab-Mir-218-P2_3p* |
| mirBase accession | None |
| Sequence |
43- AUGGUUCCGUCAAGCACCAUG -64
Get sequence
|
