MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-27-P4

Family name MIR-27 (all species)
Seed AGAACUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-27-P2  Sto-Mir-27-P3a  Sto-Mir-27-P3b 
Orthologues Cmi-Mir-27-P4  Dre-Mir-27-P4a  Gmo-Mir-27-P4a  Gmo-Mir-27-P4b  Lch-Mir-27-P4  Loc-Mir-27-P4  Mal-Mir-27-P4a  Mal-Mir-27-P4b  Tni-Mir-27-P4a  Tni-Mir-27-P4b  Xla-Mir-27-P4c  Xla-Mir-27-P4d  Xtr-Mir-27-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01000014.1: 1438467-1438532 [+]
Precursor
(pre-Mir +30nt flank)
UCGCCAGAGAAAUUCCUCUUUAGACUGGCCUAGAACUUAGCUAUUUGGAGAGCAGUGGCCUUCAAUGAAAUCCUGUUCACAGUGGCUAAGUUCAGUUCCUCUGAAGAAUUUUACAAUUGCAUCAAU
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Structure
        10           20        30        40         50        60  
UCGCCAGAGAAAUUCCU---|      CU GC  A             -    G  CAGUGGCCU 
                    CUUUAGA  G  CU GAACUUAGCUAUU UGGA AG         U
                    GAAGUCU  C  GA CUUGAAUCGGUGA ACUU UC         C
UAACUACGUUAACAUUUUAA^      C- UU  -             C    G  CUAAAGUAA 
    120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Sto-Mir-27-P4_5p
mirBase accessionNone
Sequence 
0- UAGAACUUAGCUAUUUGGAGAGC -23
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Co-mature sequence

Sto-Mir-27-P4_3p
mirBase accessionNone
Sequence 
45- UUCACAGUGGCUAAGUUCAGU -66
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