MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-27-P3a

Family name MIR-27 (all species)
Seed GGACUUA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-27-P2  Sto-Mir-27-P3b  Sto-Mir-27-P4 
Orthologues Aca-Mir-27-P3  Ami-Mir-27-P3  Bta-Mir-27-P3  Cfa-Mir-27-P3  Cja-Mir-27-P3  Cmi-Mir-27-P3  Cpi-Mir-27-P3  Cpo-Mir-27-P3  Dno-Mir-27-P3  Dre-Mir-27-P3  Eca-Mir-27-P3  Ete-Mir-27-P3  Gga-Mir-27-P3  Gja-Mir-27-P3  Gmo-Mir-27-P3  Hsa-Mir-27-P3  Laf-Mir-27-P3  Lch-Mir-27-P3  Loc-Mir-27-P3  Mal-Mir-27-P3  Mdo-Mir-27-P3  Mml-Mir-27-P3  Mmr-Mir-27-P3  Mmu-Mir-27-P3  Neu-Mir-27-P3  Oan-Mir-27-P3  Ocu-Mir-27-P3  Pab-Mir-27-P3  Pbv-Mir-27-P3  Rno-Mir-27-P3  Sha-Mir-27-P3  Tgu-Mir-27-P3  Tni-Mir-27-P3  Xtr-Mir-27-P3 
Node of Origin (locus) S. torazame
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01001728.1: 154600-154664 [-]
Precursor
(pre-Mir +30nt flank)
GGGAUUUUGUCUCUGAGCCCUGUGCGGUGAAGGACUUAGCUAACUCUGUGAACAGAUCUUUGAAUGCCUUCAUGUUCACAGUGGCUAAGUUCCGCACCUCAGGGGGUCAAACGCAAGAGGAUUUC
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Structure
        10          20        30        40        50        60   
GGGAUUUUGUCUCUGAG--|   G  C    AA           ACU         GAUCUUUG 
                   CCCU UG GGUG  GGACUUAGCUA   CUGUGAACA        A
                   GGGG AC CCAC  CUUGAAUCGGU   GACACUUGU        A
CUUUAGGAGAACGCAAACU^   G  U    GC           ---         ACUUCCGU 
   120       110       100        90           80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Sto-Mir-27-P3a_5p
mirBase accessionNone
Sequence 
0- AGGACUUAGCUAACUCUGUGAACA -24
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Co-mature sequence

Sto-Mir-27-P3a_3p
mirBase accessionNone
Sequence 
44- UUCACAGUGGCUAAGUUCCGC -65
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