| MirGeneDB ID | Sto-Mir-27-P3b |
|---|---|
| Family name | MIR-27 (all species) |
| Seed | UCACAGU |
| Species | Cloudy Catshark (Scyliorhinus torazame) |
| MiRBase ID | |
| Paralogues | Sto-Mir-27-P2 Sto-Mir-27-P3a Sto-Mir-27-P4 |
| Orthologues | Aca-Mir-27-P3 Ami-Mir-27-P3 Bta-Mir-27-P3 Cfa-Mir-27-P3 Cja-Mir-27-P3 Cmi-Mir-27-P3 Cpi-Mir-27-P3 Cpo-Mir-27-P3 Dno-Mir-27-P3 Dre-Mir-27-P3 Eca-Mir-27-P3 Ete-Mir-27-P3 Gga-Mir-27-P3 Gja-Mir-27-P3 Gmo-Mir-27-P3 Hsa-Mir-27-P3 Laf-Mir-27-P3 Lch-Mir-27-P3 Loc-Mir-27-P3 Mal-Mir-27-P3 Mdo-Mir-27-P3 Mml-Mir-27-P3 Mmr-Mir-27-P3 Mmu-Mir-27-P3 Neu-Mir-27-P3 Oan-Mir-27-P3 Ocu-Mir-27-P3 Pab-Mir-27-P3 Pbv-Mir-27-P3 Rno-Mir-27-P3 Sha-Mir-27-P3 Tgu-Mir-27-P3 Tni-Mir-27-P3 Xtr-Mir-27-P3 |
| Node of Origin (locus) | S. torazame |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003427355_STO_add) |
BFAA01332160.1: 683-746 [-] |
| Precursor (pre-Mir +30nt flank) | AGGGCUUAGCUAACUUGUGAACAGAGUUGUAAUGGUCUCCUUGUUCACAGUGGCUAAGUUCCGCGet precursor sequence |
| Structure | 10 20 30 A--| AC -- UUGU GGGCUUAGCUA UUGUGAACA GAG A CUUGAAUCGGU GACACUUGU CUC A CGC^ -- UC UGGU 60 50 40 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Sto-Mir-27-P3b_5p* |
| mirBase accession | None |
| Sequence |
0- AGGGCUUAGCUAACUUGUGAACA -23
Get sequence
|
| Mature sequence | Sto-Mir-27-P3b_3p |
| mirBase accession | None |
| Sequence |
43- UUCACAGUGGCUAAGUUCCGC -64
Get sequence
|
