MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-27-P3

Family name MIR-27 (all species)
Seed UCACAGU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-27-P2 
Orthologues Aca-Mir-27-P3  Ami-Mir-27-P3  Bta-Mir-27-P3  Cfa-Mir-27-P3  Cja-Mir-27-P3  Cmi-Mir-27-P3  Cpi-Mir-27-P3  Cpo-Mir-27-P3  Dno-Mir-27-P3  Dre-Mir-27-P3  Eca-Mir-27-P3  Ete-Mir-27-P3  Gga-Mir-27-P3  Gja-Mir-27-P3  Gmo-Mir-27-P3  Hsa-Mir-27-P3  Laf-Mir-27-P3  Lch-Mir-27-P3  Loc-Mir-27-P3  Mal-Mir-27-P3  Mdo-Mir-27-P3  Mml-Mir-27-P3  Mmr-Mir-27-P3  Mmu-Mir-27-P3  Neu-Mir-27-P3  Oan-Mir-27-P3  Ocu-Mir-27-P3  Pab-Mir-27-P3  Pbv-Mir-27-P3  Rno-Mir-27-P3  Sto-Mir-27-P3a  Sto-Mir-27-P3b  Tgu-Mir-27-P3  Tni-Mir-27-P3  Xla-Mir-27-P3c  Xla-Mir-27-P3d  Xtr-Mir-27-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL841415.1: 821157-821219 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-27-P3)		 Mir-23-P3 GL841415.1: 820975-821032 [+] UCSC Ensembl
Mir-24-P3 GL841415.1: 821300-821359 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCCCCCAGCCCAGCCUGGCCUGAGGAGCAGGACUUAGCUGCCUUGUGAACAGAGUCAGCAUCAUAUUGUGUUCACAGUGGCUAAGUUCCGCCCCCCUUGCCCCCCUACCCUUGGCCACCUU
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Structure
        10          20          30        40        50        60  
GGCCCCCCAGCCCAGCCU--|  CU    A--  A         UG CU        GAGUCAGC 
                    GGC  GAGG   GC GGACUUAGC  C  UGUGAACA        \
                    CCG  UUCC   CG CUUGAAUCG  G  ACACUUGU        A
UUCCACCGGUUCCCAUCCCC^  --    CCC  C         GU --        GUUAUACU 
 120       110         100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-27-P3_5p*
mirBase accessionNone
Sequence 
0- AGGACUUAGCUGCCUUGUGAACA -23
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Mature sequence

Sha-Mir-27-P3_3p
mirBase accessionNone
Sequence 
42- UUCACAGUGGCUAAGUUCCGC -63
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