MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-24-P3

Family name MIR-24 (all species)
Seed GGCUCAG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-24-2
Paralogues Sha-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL841415.1: 821300-821359 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-23-P3 GL841415.1: 820975-821032 [+] UCSC Ensembl
Mir-24-P3 GL841415.1: 821300-821359 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUCUAGGUCUCACUGGGCUCUGCCUCCUGUGCCUACUGAGCUGAAACACAGUUGCUUUGGAUAAACUGGCUCAGUUCAGCAGGAACAGGAGUCUGGCCUUCUCCUGGAGACACCUGCC
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Structure
        10           20        30        40        50         
GCUUCUAGGUCUCACUG---|   CUGC       G   A         AA  CAGUUGCU 
                    GGCU    CUCCUGU CCU CUGAGCUGA  CA        U
                    CCGG    GAGGACA GGA GACUUGACU  GU        U
CCGUCCACAGAGGUCCUCUU^   UCU-       A   C         CG  CAAAUAGG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAAACACA -22
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Mature sequence

Sha-Mir-24-P3_3p
mirBase accessionMIMAT0022787
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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