MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-24-P3

Family name MIR-24 (all species)
Seed GGCUCAG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues Tgu-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)		 30: 3317000-3317059 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCCCGGACACCCCCGGGCGCCGCCCCCGGUGCCCGCUGAGCUGAUUUGCAGUUGCUUUGGAUAAACUGGCUCAGUUCAGCAGGAACAGGGGUCGGGCCCCCGCACCCCGAGACCCCCA
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Structure
        10           20        30        40        50        60
ACCCCCGGACACCCCCG---|  G   C    G  G  C          UUUG    UGCUU 
                    GGC CCG CCCC GU CC GCUGAGCUGA    CAGU     U
                    CCG GGC GGGG CA GG CGACUUGACU    GUCA     G
ACCCCCAGAGCCCCACGCCC^  -   U    A  A  A          CG--    AAUAG 
.       110       100         90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCCGCUGAGCUGAUUUGCAGU -24
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Mature sequence

Tgu-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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