MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-24-P3

Family name MIR-24 (all species)
Seed GGCUCAG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-24-2
Paralogues Cfa-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr20: 48620685-48620744 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-181-P2c chr20: 48593159-48593221 [-] UCSC Ensembl
Mir-181-P1c chr20: 48593343-48593403 [-] UCSC Ensembl
Mir-23-P3 chr20: 48620332-48620390 [+] UCSC Ensembl
Mir-27-P3 chr20: 48620555-48620616 [+] UCSC Ensembl
Mir-24-P3 chr20: 48620685-48620744 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUCUGGGCCUCCCUGGGCUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGAUUUGUGCAGACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCCCUCGGAGCCUGUGGCGCC
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Structure
        10           20        30        40        50        60
CUGUCUGGGCCUCCCUG---|    U C    C  G   A         AACA    UGAUU 
                    GGCUC G CUCC GU CCU CUGAGCUGA    CAGU     U
                    CCGAG C GAGG CA GGA GACUUGACU    GUCA     G
CCGCGGUGUCCGAGGCUCCC^    - U    A  A   C         CG--    GACGU 
.       110       100         90        80          70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAAACACAGU -24
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Mature sequence

Cfa-Mir-24-P3_3p
mirBase accessionMIMAT0006614
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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Proposed targets TargetScanVert: cfa-miR-24
miRDB: MIMAT0006614