MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-24-P3

Family name MIR-24 (all species)
Seed GGCUCAG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054699.2: 13876094-13876153 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGCCUGGCCUCCCUGGGCUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGGUUUGUGUACACUGGCUCAGUUCAGCAGGAACAGGGGUCAAGCCCCCUUGGAGCCUGCAGCCCC
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Structure
        10           20        30        40        50        60
GCUGCCUGGCCUCCCUG---|   CU   U  C  G   A         AACA    UGGUU 
                    GGCU  GCC CC GU CCU CUGAGCUGA    CAGU     U
                    CCGA  UGG GG CA GGA GACUUGACU    GUCA     G
CCCCGACGUCCGAGGUUCCC^   AC   -  A  A   C         CG--    CAUGU 
.       110       100         90        80          70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAAACACAGU -24
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Mature sequence

Pab-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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