| MirGeneDB ID | Pab-Mir-24-P3 |
|---|---|
| Family name | MIR-24 (all species) |
| Seed | GGCUCAG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-24-P2 |
| Orthologues | Aca-Mir-24-P3 Ami-Mir-24-P3 Bta-Mir-24-P3 Cfa-Mir-24-P3 Cja-Mir-24-P3 Cmi-Mir-24-P3 Cpi-Mir-24-P3 Cpo-Mir-24-P3 Dno-Mir-24-P3 Dre-Mir-24-P3 Eca-Mir-24-P3 Ete-Mir-24-P3 Gga-Mir-24-P3 Gja-Mir-24-P3 Gmo-Mir-24-P3 Hsa-Mir-24-P3 Laf-Mir-24-P3 Lch-Mir-24-P3 Loc-Mir-24-P3 Mdo-Mir-24-P3 Mml-Mir-24-P3 Mmr-Mir-24-P3 Mmu-Mir-24-P3 Mun-Mir-24-P3a Mun-Mir-24-P3b Neu-Mir-24-P3 Oan-Mir-24-P3 Ocu-Mir-24-P3 Pbv-Mir-24-P3 Rno-Mir-24-P3 Sha-Mir-24-P3 Sto-Mir-24-P3 Tgu-Mir-24-P3 Tni-Mir-24-P3 Xla-Mir-24-P3c Xla-Mir-24-P3d Xtr-Mir-24-P3 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 13876094-13876153 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUGCCUGGCCUCCCUGGGCUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGGUUUGUGUACACUGGCUCAGUUCAGCAGGAACAGGGGUCAAGCCCCCUUGGAGCCUGCAGCCCCGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCUGCCUGGCCUCCCUG---| CU U C G A AACA UGGUU GGCU GCC CC GU CCU CUGAGCUGA CAGU U CCGA UGG GG CA GGA GACUUGACU GUCA G CCCCGACGUCCGAGGUUCCC^ AC - A A C CG-- CAUGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | No |
| Star sequence | Pab-Mir-24-P3_5p* |
| mirBase accession | None |
| Sequence |
0- GUGCCUACUGAGCUGAAACACAGU -24
Get sequence
|
| Mature sequence | Pab-Mir-24-P3_3p |
| mirBase accession | None |
| Sequence |
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence
|
