MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-24-P3

Family name MIR-24 (all species)
Seed GGCUCAG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021936.1: 12279644-12279703 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGCCCGGCCUCCCUGGGCUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGGUUUGUGCACACUGGCUCAGUUCAGCAGGAACAGGGGUCAAGCCCGCUUGGAGCCCGCAGCCCC
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Structure
        10           20        30        40        50        60
GCUGCCCGGCCUCCCUG---|   CU   U  C  G   A         AACA    UGGUU 
                    GGCU  GCC CC GU CCU CUGAGCUGA    CAGU     U
                    CCGA  UGG GG CA GGA GACUUGACU    GUCA     G
CCCCGACGCCCGAGGUUCGC^   AC   -  A  A   C         CG--    CACGU 
.       110       100         90        80          70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAAACACAGU -24
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Mature sequence

Cja-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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