MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-23a
Paralogues Sha-Mir-23-P2 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL841415.1: 820975-821032 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-23-P3 GL841415.1: 820975-821032 [+] UCSC Ensembl
Mir-24-P3 GL841415.1: 821300-821359 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGACCCAGCACCCCUGAGCCUUGGCCGGCUGGGGUUCCUGGGGAUGGGAUUUGAUUACUGCCACAAAUCACAUUGCCAGGGAUUUCCAACUGACCACUGGCCCUGCUGCUGAAGCUGC
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Structure
        10        20         30         40        50        
CGACCCAGCACCCCUGAG  U-   C   C   -|        G    G     GAUUA 
                  CC  UGG CGG UGG GGUUCCUGG GAUG GAUUU     C
                  GG  ACC GUC ACC UUAGGGACC UUAC CUAAA     U
CGUCGAAGUCGUCGUCCC  UC   A   A   U^        G    A     CACCG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-23-P3_5p*
mirBase accessionNone
Sequence 
0- GGGGUUCCUGGGGAUGGGAUUU -22
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Mature sequence

Sha-Mir-23-P3_3p
mirBase accessionMIMAT0022786
Sequence 
36- AUCACAUUGCCAGGGAUUUCCA -58
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